RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 B3GNT9Q6UX72 402 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 RNF19BQ6ZMZ0 732 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 DYMQ7RTS9 669 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 CCDC65Q8IXS2 484 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 ADGRF4Q8IZF3 695 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 MYCBPAPQ8TBZ2 947 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 SH3TC2Q8TF17 1288 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 ATP8B4Q8TF62 1192 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 P3H4Q92791 437 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 SLC35C1Q96A29 364 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 COA7Q96BR5 231 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 EEF2KMTQ96G04 330 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 FIZ1Q96SL8 496 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 P2RX7Q99572 595 aaKnown RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.46□□□□□ -1.227e-9■■□□□ 12.9
UBR4-212ENST00000475973 MKNK1Q9BUB5 465 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 POLR3CQ9BUI4 534 aaPredicted RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 LSM14BQ9BX40 385 aaKnown RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 PACSIN1Q9BY11 444 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 UBA5Q9GZZ9 404 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 EPB41L4BQ9H329 900 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 CCDC134Q9H6E4 229 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 METTL14Q9HCE5 456 aaKnown RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 GINM1Q9NU53 330 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 TMOD4Q9NZQ9 345 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 DDX25Q9UHL0 483 aaKnown RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 TSR3Q9UJK0 312 aaKnown RBP7.46□□□□□ -1.22
UBR4-212ENST00000475973 NFU1Q9UMS0 254 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 SYNPO2Q9UMS6 1093 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 STX8Q9UNK0 236 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 PCDHA3Q9Y5H8 950 aa7.46□□□□□ -1.22
UBR4-212ENST00000475973 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.46□□□□□ -1.22
UBR4-212ENST00000475973 SIPA1L1O43166 1804 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 A0A0U1RQG5 324 aaPredicted RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 MYO1FO00160 1098 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 DDX3XO00571 662 aaKnown RBP eCLIP7.45□□□□□ -1.22
UBR4-212ENST00000475973 CETN3O15182 167 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 EIF3DO15371 548 aaKnown RBP eCLIP7.45□□□□□ -1.22
UBR4-212ENST00000475973 SART1O43290 800 aaKnown RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 MED24O75448 989 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 MTA2O94776 668 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 ERLIN2O94905 339 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 TTLL1O95922 423 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 KRT14P02533 472 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 ALAS1P13196 640 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 AKR1B1P15121 316 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 EN2P19622 333 aaPredicted RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 NR1D1P20393 614 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 HNRNPH1P31943 449 aaKnown RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 CXCR5P32302 372 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 SOX11P35716 441 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 HSD17B3P37058 310 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 GCLCP48506 637 aaPredicted RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 ZNF131P52739 623 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 HMGCS2P54868 508 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 POLR2FP61218 127 aaKnown RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 PTK2Q05397 1052 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 ZNF844Q08AG5 666 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 SPP2Q13103 211 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 LRRC41Q15345 812 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 TRADDQ15628 312 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 PPP2R5EQ16537 467 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 KNOP1Q1ED39 458 aaKnown RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 KIAA0753Q2KHM9 967 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 DUPD1Q68J44 220 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 BTNL9Q6UXG8 535 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 CACNA2D4Q7Z3S7 1137 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 NT5DC3Q86UY8 548 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 NLRP14Q86W24 1093 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 SIAH1Q8IUQ4 282 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 SLC9A9Q8IVB4 645 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 SLFN12Q8IYM2 578 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 ARFGAP2Q8N6H7 521 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 METTL13Q8N6R0 699 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 ANKRD13CQ8N6S4 541 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 RASSF8Q8NHQ8 419 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 ZNF473Q8WTR7 871 aaKnown RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 GTF3C2Q8WUA4 911 aaPredicted RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 CUL5Q93034 780 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 LRRC45Q96CN5 670 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 THAP11Q96EK4 314 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 FAM20AQ96MK3 541 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 CCDC43Q96MW1 224 aaKnown RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 GDAP1L1Q96MZ0 367 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 CCT8L2Q96SF2 557 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 TACO1Q9BSH4 297 aaKnown RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 GPR88Q9GZN0 384 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 NEUROG2Q9H2A3 272 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 DEF6Q9H4E7 631 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 ZDHHC18Q9NUE0 388 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 TYW1Q9NV66 732 aaKnown RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.45□□□□□ -1.22
UBR4-212ENST00000475973 GEMIN8Q9NWZ8 242 aaKnown RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 NYAP2Q9P242 653 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.45□□□□□ -1.22
UBR4-212ENST00000475973 ADAMTS1Q9UHI8 967 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 VAV3Q9UKW4 847 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 PCDHA12Q9UN75 941 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 ASTN1O14525 1302 aa7.45□□□□□ -1.22
UBR4-212ENST00000475973 UBE4BO95155 1302 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms