RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 CNNM3Q8NE01 707 aa16.65■□□□□ 0.26
SNX13-207ENST00000475800 CCDC34Q96HJ3 373 aa16.65■□□□□ 0.26
SNX13-207ENST00000475800 CCDC113Q9H0I3 377 aa16.65■□□□□ 0.26
SNX13-207ENST00000475800 FAM105AQ9NUU6 356 aa16.65■□□□□ 0.26
SNX13-207ENST00000475800 HPSEQ9Y251 543 aa16.65■□□□□ 0.26
SNX13-207ENST00000475800 ADGRA3Q8IWK6 1321 aa16.65■□□□□ 0.26
SNX13-207ENST00000475800 A0A1B0GVL5 298 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 N4BP3O15049 544 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 TRAK2O60296 914 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 ZNF623O75123 536 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 SLFN14P0C7P3 912 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 MAPTP10636 758 aaKnown RBP16.64■□□□□ 0.25
SNX13-207ENST00000475800 ARF4P18085 180 aaPredicted RBP16.64■□□□□ 0.25
SNX13-207ENST00000475800 NCKAP1LP55160 1127 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 CACNB1Q02641 598 aaPredicted RBP16.64■□□□□ 0.25
SNX13-207ENST00000475800 STRN3Q13033 797 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 PRPF4BQ13523 1007 aaKnown RBP16.64■□□□□ 0.25
SNX13-207ENST00000475800 TMEM132AQ24JP5 1023 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 CNNM4Q6P4Q7 775 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 DYMQ7RTS9 669 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 CCDC65Q8IXS2 484 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 FSIP1Q8NA03 581 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 DNAJC19Q96DA6 116 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 PGBD4Q96DM1 585 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 KIFC3Q9BVG8 833 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 ZHX3Q9H4I2 956 aa16.64■□□□□ 0.25
SNX13-207ENST00000475800 TRANK1O15050 2925 aa16.63■□□□□ 0.25
SNX13-207ENST00000475800 RALGAPA2Q2PPJ7 1873 aa16.63■□□□□ 0.25
SNX13-207ENST00000475800 A0A1B0GUA9 196 aa16.63■□□□□ 0.25
SNX13-207ENST00000475800 SLC16A4O15374 487 aa16.63■□□□□ 0.25
SNX13-207ENST00000475800 DGKIO75912 1065 aa16.63■□□□□ 0.25
SNX13-207ENST00000475800 SLC27A1Q6PCB7 646 aa16.63■□□□□ 0.25
SNX13-207ENST00000475800 FAM178BQ8IXR5 827 aa16.63■□□□□ 0.25
SNX13-207ENST00000475800 CMTR2Q8IYT2 770 aaKnown RBP16.63■□□□□ 0.25
SNX13-207ENST00000475800 HACE1Q8IYU2 909 aa16.63■□□□□ 0.25
SNX13-207ENST00000475800 TMEM161BQ8NDZ6 487 aa16.63■□□□□ 0.25
SNX13-207ENST00000475800 SP7Q8TDD2 431 aaPredicted RBP16.63■□□□□ 0.25
SNX13-207ENST00000475800 ADPGKQ9BRR6 497 aa16.63■□□□□ 0.25
SNX13-207ENST00000475800 MRPL4Q9BYD3 311 aaKnown RBP16.63■□□□□ 0.25
SNX13-207ENST00000475800 TRIM9Q9C026 710 aa16.63■□□□□ 0.25
SNX13-207ENST00000475800 TRIM6Q9C030 488 aaPredicted RBP16.63■□□□□ 0.25
SNX13-207ENST00000475800 NLRC5Q86WI3 1866 aa16.63■□□□□ 0.25
SNX13-207ENST00000475800 COL4A4P53420 1690 aaPredicted RBP16.62■□□□□ 0.25
SNX13-207ENST00000475800 FRMD3A2A2Y4 597 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 K7ENM7 598 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 B4GALT5O43286 388 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 MYL1P05976 194 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 BMP1P13497 986 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 IDEP14735 1019 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 LIG1P18858 919 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 COL9A1P20849 921 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 NDUFA8P51970 172 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 HAUS6Q7Z4H7 955 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 ZNF598Q86UK7 904 aaKnown RBP16.62■□□□□ 0.25
SNX13-207ENST00000475800 ABI1Q8IZP0 508 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 ZNF689Q96CS4 500 aaPredicted RBP16.62■□□□□ 0.25
SNX13-207ENST00000475800 CPB2Q96IY4 423 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 C7orf25Q9BPX7 421 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 ST6GALNAC4Q9H4F1 302 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 RC3H2Q9HBD1 1191 aaKnown RBP16.62■□□□□ 0.25
SNX13-207ENST00000475800 RTN4Q9NQC3 1192 aaKnown RBP16.62■□□□□ 0.25
SNX13-207ENST00000475800 OLFML3Q9NRN5 406 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 PANK4Q9NVE7 773 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 PCDHB2Q9Y5E7 798 aa16.62■□□□□ 0.25
SNX13-207ENST00000475800 NCOR1O75376 2440 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 ACTN4O43707 911 aaKnown RBP16.61■□□□□ 0.25
SNX13-207ENST00000475800 LPXNO60711 386 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 IBSPP21815 317 aaPredicted RBP16.61■□□□□ 0.25
SNX13-207ENST00000475800 ASIC1P78348 528 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 ALCAMQ13740 583 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 AAK1Q2M2I8 961 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 DCAF4L1Q3SXM0 396 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 UBXN11Q5T124 520 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 ATF7IP2Q5U623 682 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 MRPL10Q7Z7H8 261 aaKnown RBP16.61■□□□□ 0.25
SNX13-207ENST00000475800 SFR1Q86XK3 245 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 FIBCD1Q8N539 461 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 TMEM87AQ8NBN3 555 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 HVCN1Q96D96 273 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 SAMD11Q96NU1 681 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 TMEM117Q9H0C3 514 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 UBN1Q9NPG3 1134 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 SERTAD1Q9UHV2 236 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 TNFSF13BQ9Y275 285 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 RWDD3Q9Y3V2 267 aa16.61■□□□□ 0.25
SNX13-207ENST00000475800 ATF7P17544 494 aaPredicted RBP16.6■□□□□ 0.25
SNX13-207ENST00000475800 BTG3Q14201 252 aaPredicted RBP16.6■□□□□ 0.25
SNX13-207ENST00000475800 HERC4Q5GLZ8 1057 aaPredicted RBP16.6■□□□□ 0.25
SNX13-207ENST00000475800 KANK3Q6NY19 840 aa16.6■□□□□ 0.25
SNX13-207ENST00000475800 ZPBP2Q6X784 338 aa16.6■□□□□ 0.25
SNX13-207ENST00000475800 STXBP4Q6ZWJ1 553 aa16.6■□□□□ 0.25
SNX13-207ENST00000475800 TAS1R3Q7RTX0 852 aa16.6■□□□□ 0.25
SNX13-207ENST00000475800 RNF169Q8NCN4 708 aa16.6■□□□□ 0.25
SNX13-207ENST00000475800 STAMQ92783 540 aa16.6■□□□□ 0.25
SNX13-207ENST00000475800 HLA-CQ95604 372 aa16.6■□□□□ 0.25
SNX13-207ENST00000475800 FIZ1Q96SL8 496 aa16.6■□□□□ 0.25
SNX13-207ENST00000475800 C17orf80Q9BSJ5 609 aa16.6■□□□□ 0.25
SNX13-207ENST00000475800 MRPL9Q9BYD2 267 aaKnown RBP16.6■□□□□ 0.25
SNX13-207ENST00000475800 PDZD7Q9H5P4 517 aa16.6■□□□□ 0.25
SNX13-207ENST00000475800 MRPL44Q9H9J2 332 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms