RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 PLA2G2FQ9BZM2 168 aa11.34□□□□□ -0.59
CCHCR1-212ENST00000475684 KRT23Q9C075 422 aa11.34□□□□□ -0.59
CCHCR1-212ENST00000475684 SMOC1Q9H4F8 434 aa11.34□□□□□ -0.59
CCHCR1-212ENST00000475684 PSTPIP2Q9H939 334 aa11.34□□□□□ -0.59
CCHCR1-212ENST00000475684 POLIQ9UNA4 740 aa11.34□□□□□ -0.59
CCHCR1-212ENST00000475684 LAMA5O15230 3695 aa11.34□□□□□ -0.59
CCHCR1-212ENST00000475684 SPDYE3A6NKU9 549 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 CYSRT1A8MQ03 144 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 DDX39AO00148 427 aaKnown RBP11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 ECI2O75521 394 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 EPN2O95208 641 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 CCNE2O96020 404 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 MX1P20591 662 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 KIF5BP33176 963 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 GPC3P51654 580 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 DSG1Q02413 1049 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 NMIQ13287 307 aaPredicted RBP11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 SEC23AQ15436 765 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 MIS18BP1Q6P0N0 1132 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 LRRC71Q8N4P6 559 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 FAM3CQ92520 227 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 DNASE1L2Q92874 299 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 AGO4Q9HCK5 861 aaKnown RBP11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 FAM105AQ9NUU6 356 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 KANSL3Q9P2N6 904 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 PCDHA6Q9UN73 950 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 CEP131Q9UPN4 1083 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 PRG3Q9Y2Y8 225 aaPredicted RBP11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 GPSM3Q9Y4H4 160 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 PCDHA8Q9Y5H6 950 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 IGF2RP11717 2491 aa11.33□□□□□ -0.6
CCHCR1-212ENST00000475684 BPTFQ12830 3046 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 C4orf47A7E2U8 309 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 K7ESF4 209 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 MAP3K13O43283 966 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 POMCP01189 267 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 HNRNPA1P09651 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 OR1G1P47890 313 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 AFF1P51825 1210 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 GAS6Q14393 721 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 UBE2SQ16763 222 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 PLA2G2CQ5R387 149 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 DAB2IPQ5VWQ8 1189 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 KIAA1211LQ6NV74 962 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 SPEM1Q8N4L4 309 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 ADAM32Q8TC27 787 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 RRP36Q96EU6 259 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 B3GALT6Q96L58 329 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 MARCH5Q9NX47 278 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 PIN4Q9Y237 131 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 NEUROG3Q9Y4Z2 214 aa11.32□□□□□ -0.6
CCHCR1-212ENST00000475684 EVPLQ92817 2033 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 ADAMTS20P59510 1910 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 MAST4O15021 2626 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 CCL16O15467 120 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 ZNF623O75123 536 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 CHRNB1P11230 501 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 CEACAM1P13688 526 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 RPL17P18621 184 aaKnown RBP11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 RAP1GAPP47736 663 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 RAB27AP51159 221 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 MFAP1P55081 439 aaKnown RBP11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 COL28A1Q2UY09 1125 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 PPM1LQ5SGD2 360 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 LIN9Q5TKA1 542 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 TCEAL6Q6IPX3 200 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 CACNA2D4Q7Z3S7 1137 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 WDR5BQ86VZ2 330 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 NPAS3Q8IXF0 933 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 RNF168Q8IYW5 571 aaPredicted RBP11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 LINC01465Q8N7H1 131 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 ING5Q8WYH8 240 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 TCEAL3Q969E4 200 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 MCRS1Q96EZ8 462 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 MS4A3Q96HJ5 214 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 BBC3Q96PG8 261 aaPredicted RBP11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 EDEM2Q9BV94 578 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 GCOM2Q9BZD3 368 aaPredicted RBP11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 BRD9Q9H8M2 597 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 CNNM2Q9H8M5 875 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 VPS45Q9NRW7 570 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 CHST7Q9NS84 486 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 FNIP2Q9P278 1114 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 SEC63Q9UGP8 760 aaKnown RBP11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 IGSF10Q6WRI0 2623 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 GREB1Q4ZG55 1949 aa11.31□□□□□ -0.6
CCHCR1-212ENST00000475684 HYAL3O43820 417 aaPredicted RBP11.3□□□□□ -0.6
CCHCR1-212ENST00000475684 XYLBO75191 536 aa11.3□□□□□ -0.6
CCHCR1-212ENST00000475684 PAPSS2O95340 614 aaPredicted RBP11.3□□□□□ -0.6
CCHCR1-212ENST00000475684 SEC24BO95487 1268 aa11.3□□□□□ -0.6
CCHCR1-212ENST00000475684 EFEMP2O95967 443 aa11.3□□□□□ -0.6
CCHCR1-212ENST00000475684 PYGBP11216 843 aa11.3□□□□□ -0.6
CCHCR1-212ENST00000475684 SFPQP23246 707 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCHCR1-212ENST00000475684 MPLP40238 635 aa11.3□□□□□ -0.6
CCHCR1-212ENST00000475684 TANGO2Q6ICL3 276 aa11.3□□□□□ -0.6
CCHCR1-212ENST00000475684 AGMOQ6ZNB7 445 aa11.3□□□□□ -0.6
CCHCR1-212ENST00000475684 KBTBD6Q86V97 674 aa11.3□□□□□ -0.6
CCHCR1-212ENST00000475684 PROSER1Q86XN7 944 aa11.3□□□□□ -0.6
CCHCR1-212ENST00000475684 ELSPBP1Q96BH3 223 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms