RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 ORC2Q13416 577 aaPredicted RBP18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 MTF1Q14872 753 aa18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 FAM102AQ5T9C2 384 aaPredicted RBP18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 OR6P1Q8NGX9 317 aa18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 ACAP3Q96P50 834 aa18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 EGFL8Q99944 293 aa18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 LIMA1Q9UHB6 759 aaKnown RBP18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 UTYO14607 1347 aa18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 SYNDIG1LA6NDD5 238 aa18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 CCDC22O60826 627 aa18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 PRAMEP78395 509 aa18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 FASTKD1Q53R41 847 aaKnown RBP18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 RHPN2Q8IUC4 686 aa18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 AGR3Q8TD06 166 aa18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 WDR24Q96S15 920 aa18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 CHCHD3Q9NX63 227 aaKnown RBP18.81■□□□□ 0.6
LPCAT1-202ENST00000475622 TDP2O95551 362 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 FGFR4P22455 802 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 EFHC2Q5JST6 749 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 C1orf228Q6PIY5 440 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 ZNF668Q96K58 619 aaPredicted RBP18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 ASPSCR1Q9BZE9 553 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 TDRD3Q9H7E2 651 aaKnown RBP18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 COG4Q9H9E3 785 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 FBXO40Q9UH90 709 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 SFMBT1Q9UHJ3 866 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 TMCC1O94876 653 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 NME3Q13232 169 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 DHX34Q14147 1143 aaKnown RBP18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 ITPRIPL1Q6GPH6 555 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 TTC30BQ8N4P2 665 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 ALG13Q9NP73 1137 aaKnown RBP18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 EMSYQ7Z589 1322 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 KRT17Q04695 432 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 NR1H4Q96RI1 486 aaPredicted RBP18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 PFASO15067 1338 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 TEX2Q8IWB9 1127 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 STAG2Q8N3U4 1231 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 GRAMD1AQ96CP6 724 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 RNPC3Q96LT9 517 aaKnown RBP18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 ZMAT2Q96NC0 199 aaKnown RBP18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 LXNQ9BS40 222 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 ZC4H2Q9NQZ6 224 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 HOXC10Q9NYD6 342 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 PNMA3Q9UL41 463 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 SFNP31947 248 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 ARSEP51690 589 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 VSNL1P62760 191 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 CLEC4GQ6UXB4 293 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 TEX12Q9BXU0 123 aa18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 FAM217BQ9NTX9 383 aaPredicted RBP18.8■□□□□ 0.6
LPCAT1-202ENST00000475622 GGPS1O95749 300 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 CDH6P55285 790 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 ARL8AQ96BM9 186 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 POLR3FQ9H1D9 316 aaPredicted RBP18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 RNF146Q9NTX7 359 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 SYNMO15061 1565 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 HLA-DPA1P20036 260 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 ADORA2BP29275 332 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 CUL3Q13618 768 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 PPP4R4Q6NUP7 873 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 DDIASQ8IXT1 998 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 RTKN2Q8IZC4 609 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 ARHGAP10A1A4S6 786 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 QRICH1Q2TAL8 776 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 TRIM72Q6ZMU5 477 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 LRRC1Q9BTT6 524 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 TSR3Q9UJK0 312 aaKnown RBP18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 MORC2Q9Y6X9 1032 aaPredicted RBP18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 UBA6A0AVT1 1052 aaPredicted RBP18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 TARSL2A2RTX5 802 aaKnown RBP18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 KIF28PB7ZC32 967 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 MOCS2O96007 188 aaPredicted RBP18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 SSTR3P32745 418 aaPredicted RBP18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 PTK2BQ14289 1009 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 RABGAP1LQ5R372 815 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 LRRC8EQ6NSJ5 796 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 OR9Q1Q8NGQ5 310 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 MTA3Q9BTC8 594 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 ZHX2Q9Y6X8 837 aa18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 ZNF335Q9H4Z2 1342 aaPredicted RBP18.79■□□□□ 0.6
LPCAT1-202ENST00000475622 HSPA9P38646 679 aaKnown RBP18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 ENOSF1Q7L5Y1 443 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 MTBPQ96DY7 904 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 GNAT1P11488 350 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 ATXN7L3BQ96GX2 97 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 MASTLQ96GX5 879 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 ZNF212Q9UDV6 495 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 NEMP1O14524 444 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 PYGLP06737 847 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 PDLIM2Q96JY6 352 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 C2orf40Q9H1Z8 148 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 SP110Q9HB58 689 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 KLC4Q9NSK0 619 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 RBAKQ9NYW8 714 aaPredicted RBP18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 CATSPER3Q86XQ3 398 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 SEPT8Q92599 483 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 SIK2Q9H0K1 926 aa18.78■□□□□ 0.6
LPCAT1-202ENST00000475622 WWP1Q9H0M0 922 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms