RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 LRFN4Q6PJG9 635 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 C3orf62Q6ZUJ4 267 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 BEND5Q7L4P6 421 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 FAM228AQ86W67 206 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 TRMT2AQ8IZ69 625 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 SVIPQ8NHG7 77 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 DQX1Q8TE96 717 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 WDR60Q8WVS4 1066 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 ZNF75CPQ92670 426 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 GFM2Q969S9 779 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 EXOC2Q96KP1 924 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 HNRNPABQ99729 332 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 BPIFA3Q9BQP9 254 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 MIS12Q9H081 205 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 EPN3Q9H201 632 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 SEMA4AQ9H3S1 761 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 DCTPP1Q9H773 170 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 CNNM2Q9H8M5 875 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 EPB41L4AQ9HCS5 686 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 AASDHPPTQ9NRN7 309 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 SLC5A4Q9NY91 659 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 IMPACTQ9P2X3 320 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 CTNNAL1Q9UBT7 734 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 L1RE1Q9UN81 338 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 ANKRD50Q9ULJ7 1429 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 UGGT1Q9NYU2 1555 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 GAKO14976 1311 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 CDHR2Q9BYE9 1310 aa6.48□□□□□ -1.37
ECHDC1-215ENST00000475319 DNMT1P26358 1616 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 A0A0B4J203 849 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 A0A1B0GVG6 124 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 ALG1L2C9J202 215 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 SPECC1L-ADORA2AF8WAN1 911 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 M0QX08 132 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 AP5Z1O43299 807 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 IDH3BO43837 385 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 ZNF254O75437 659 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 RFPL3O75679 317 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 ALDH1L1O75891 902 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 PRPF6O94906 941 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 KRT14P02533 472 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 PDHBP11177 359 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 TOP1P11387 765 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 UBL4AP11441 157 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 PORP16435 677 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 GPSM2P81274 684 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 MYO1EQ12965 1108 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 DPYSQ14117 519 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 SPCS2Q15005 226 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 NDUFA5Q16718 116 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 IRGCQ6NXR0 463 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 ELMSAN1Q6PJG2 1045 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 SLC2A7Q6PXP3 512 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 FIP1L1Q6UN15 594 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 PHLDB2Q86SQ0 1253 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 EXOC3L1Q86VI1 746 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 PAF1Q8N7H5 531 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 STKLD1Q8NE28 680 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 CASP10Q92851 521 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 TP53INP1Q96A56 240 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 SDCCAG3Q96C92 435 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 ASIC4Q96FT7 647 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 FGD4Q96M96 766 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 CLUHP3Q96NS8 147 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 GPR101Q96P66 508 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 CCDC28BQ9BUN5 200 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 NUP58Q9BVL2 599 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 NAA15Q9BXJ9 866 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 TRIM5Q9C035 493 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 DNAI2Q9GZS0 605 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 RMND1Q9NWS8 449 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 NDUFA13Q9P0J0 144 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 DSEQ9UL01 958 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 CCPG1Q9ULG6 757 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 SLC6A14Q9UN76 642 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 PCDHGB3Q9Y5G1 929 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 FADS3Q9Y5Q0 445 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 TIAM1Q13009 1591 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 NKTRP30414 1462 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 MBD5Q9P267 1494 aa6.47□□□□□ -1.37
ECHDC1-215ENST00000475319 CCDC163A0A0D9SF12 145 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 C2orf81A6NN90 581 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 GSG1L2A8MUP6 293 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 E9PMD0 336 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 TNFRSF10CO14798 259 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 N4BP3O15049 544 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 FOXD2O60548 495 aaPredicted RBP6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 TACC1O75410 805 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 SUPT3HO75486 399 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 ATP6V1G2O95670 118 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 ALDH2P05091 517 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 RBP3P10745 1247 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 KRT4P19013 534 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 BTF3P20290 206 aaKnown RBP6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 RRM1P23921 792 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 SLC16A2P36021 539 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 ACADSBP45954 432 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 UBXN2AP68543 259 aa6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 MRPL28Q13084 256 aaKnown RBP6.46□□□□□ -1.37
ECHDC1-215ENST00000475319 TNIP1Q15025 636 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms