RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 OTOP3Q7RTS5 596 aa27.76■■■□□ 2.03
TMEM54-205ENST00000475208 SLFN12Q8IYM2 578 aa27.76■■■□□ 2.03
TMEM54-205ENST00000475208 EIF2AQ9BY44 585 aaKnown RBP27.76■■■□□ 2.03
TMEM54-205ENST00000475208 MFSD1Q9H3U5 465 aa27.76■■■□□ 2.03
TMEM54-205ENST00000475208 XPNPEP1Q9NQW7 623 aa27.76■■■□□ 2.03
TMEM54-205ENST00000475208 TPCN1Q9ULQ1 816 aa27.76■■■□□ 2.03
TMEM54-205ENST00000475208 FAM205CA6NFA0 338 aa27.75■■■□□ 2.03
TMEM54-205ENST00000475208 PFKFB2O60825 505 aa27.75■■■□□ 2.03
TMEM54-205ENST00000475208 OR1G1P47890 313 aa27.75■■■□□ 2.03
TMEM54-205ENST00000475208 AK2P54819 239 aa27.75■■■□□ 2.03
TMEM54-205ENST00000475208 ASTLQ6HA08 431 aaPredicted RBP27.75■■■□□ 2.03
TMEM54-205ENST00000475208 TPH2Q8IWU9 490 aa27.75■■■□□ 2.03
TMEM54-205ENST00000475208 COLGALT2Q8IYK4 626 aa27.75■■■□□ 2.03
TMEM54-205ENST00000475208 GAD1Q99259 594 aa27.75■■■□□ 2.03
TMEM54-205ENST00000475208 ZFHX2Q9C0A1 2572 aaPredicted RBP27.74■■■□□ 2.03
TMEM54-205ENST00000475208 C2orf16Q68DN1 1984 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 BAG4O95429 457 aaKnown RBP27.74■■■□□ 2.03
TMEM54-205ENST00000475208 AXLP30530 894 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 MLH1P40692 756 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 PTENP60484 403 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 MXD4Q14582 209 aaPredicted RBP27.74■■■□□ 2.03
TMEM54-205ENST00000475208 PCBP1Q15365 356 aaKnown RBP eCLIP27.74■■■□□ 2.03
TMEM54-205ENST00000475208 NOTUMQ6P988 496 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 C15orf39Q6ZRI6 1047 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 CCDC51Q96ER9 411 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 CPB2Q96IY4 423 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 RPS6KC1Q96S38 1066 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 RNF39Q9H2S5 420 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 MAN1C1Q9NR34 630 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 ORC3Q9UBD5 711 aaPredicted RBP27.74■■■□□ 2.03
TMEM54-205ENST00000475208 HES2Q9Y543 173 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 PLXNA3P51805 1871 aa27.74■■■□□ 2.03
TMEM54-205ENST00000475208 ARL5CA6NH57 179 aa27.73■■■□□ 2.03
TMEM54-205ENST00000475208 INO80B-WBP1J3KQ70 363 aa27.73■■■□□ 2.03
TMEM54-205ENST00000475208 INPPL1O15357 1258 aa27.73■■■□□ 2.03
TMEM54-205ENST00000475208 CTDNEP1O95476 244 aa27.73■■■□□ 2.03
TMEM54-205ENST00000475208 TAS1R1Q7RTX1 841 aa27.73■■■□□ 2.03
TMEM54-205ENST00000475208 CSRNP2Q9H175 543 aa27.73■■■□□ 2.03
TMEM54-205ENST00000475208 SSX2IPQ9Y2D8 614 aa27.73■■■□□ 2.03
TMEM54-205ENST00000475208 TEX28O15482 410 aa27.72■■■□□ 2.03
TMEM54-205ENST00000475208 SLITRK3O94933 977 aa27.72■■■□□ 2.03
TMEM54-205ENST00000475208 ADH1AP07327 375 aa27.72■■■□□ 2.03
TMEM54-205ENST00000475208 SCNN1GP51170 649 aa27.72■■■□□ 2.03
TMEM54-205ENST00000475208 DSC1Q08554 894 aa27.72■■■□□ 2.03
TMEM54-205ENST00000475208 NR5A1Q13285 461 aa27.72■■■□□ 2.03
TMEM54-205ENST00000475208 TFDP1Q14186 410 aa27.72■■■□□ 2.03
TMEM54-205ENST00000475208 CMASQ8NFW8 434 aaPredicted RBP27.72■■■□□ 2.03
TMEM54-205ENST00000475208 EIF2AK1Q9BQI3 630 aaKnown RBP27.72■■■□□ 2.03
TMEM54-205ENST00000475208 APOL6Q9BWW8 343 aa27.72■■■□□ 2.03
TMEM54-205ENST00000475208 KRT2P35908 639 aa27.71■■■□□ 2.03
TMEM54-205ENST00000475208 GLUD2P49448 558 aa27.71■■■□□ 2.03
TMEM54-205ENST00000475208 CLCN5P51795 746 aa27.71■■■□□ 2.03
TMEM54-205ENST00000475208 NCBP1Q09161 790 aaKnown RBP27.71■■■□□ 2.03
TMEM54-205ENST00000475208 TDGQ13569 410 aa27.71■■■□□ 2.03
TMEM54-205ENST00000475208 CAPSQ13938 189 aa27.71■■■□□ 2.03
TMEM54-205ENST00000475208 CWF19L1Q69YN2 538 aaKnown RBP27.71■■■□□ 2.03
TMEM54-205ENST00000475208 IFNLR1Q8IU57 520 aaPredicted RBP27.71■■■□□ 2.03
TMEM54-205ENST00000475208 RNF168Q8IYW5 571 aaPredicted RBP27.71■■■□□ 2.03
TMEM54-205ENST00000475208 FLCNQ8NFG4 579 aa27.71■■■□□ 2.03
TMEM54-205ENST00000475208 ASAP3Q8TDY4 903 aa27.71■■■□□ 2.03
TMEM54-205ENST00000475208 WASF1Q92558 559 aa27.71■■■□□ 2.03
TMEM54-205ENST00000475208 ZFP42Q96MM3 310 aa27.71■■■□□ 2.03
TMEM54-205ENST00000475208 MIOSQ9NXC5 875 aa27.71■■■□□ 2.03
TMEM54-205ENST00000475208 PROB1E7EW31 1015 aa27.7■■■□□ 2.02
TMEM54-205ENST00000475208 F8W810 466 aa27.7■■■□□ 2.02
TMEM54-205ENST00000475208 EFEMP2O95967 443 aa27.7■■■□□ 2.02
TMEM54-205ENST00000475208 GLUD1P00367 558 aa27.7■■■□□ 2.02
TMEM54-205ENST00000475208 MBTD1Q05BQ5 628 aa27.7■■■□□ 2.02
TMEM54-205ENST00000475208 AMHR2Q16671 573 aa27.7■■■□□ 2.02
TMEM54-205ENST00000475208 TNFRSF25Q93038 417 aa27.7■■■□□ 2.02
TMEM54-205ENST00000475208 KCNK12Q9HB15 430 aa27.7■■■□□ 2.02
TMEM54-205ENST00000475208 BRMS1Q9HCU9 246 aa27.7■■■□□ 2.02
TMEM54-205ENST00000475208 DUSP12Q9UNI6 340 aa27.7■■■□□ 2.02
TMEM54-205ENST00000475208 MYO15AQ9UKN7 3530 aa27.69■■■□□ 2.02
TMEM54-205ENST00000475208 DGAT1O75907 488 aa27.69■■■□□ 2.02
TMEM54-205ENST00000475208 LYPLA2O95372 231 aa27.69■■■□□ 2.02
TMEM54-205ENST00000475208 POU5F1BQ06416 359 aa27.69■■■□□ 2.02
TMEM54-205ENST00000475208 KIAA0319Q5VV43 1072 aa27.69■■■□□ 2.02
TMEM54-205ENST00000475208 ELMSAN1Q6PJG2 1045 aa27.69■■■□□ 2.02
TMEM54-205ENST00000475208 CCDC43Q96MW1 224 aaKnown RBP27.69■■■□□ 2.02
TMEM54-205ENST00000475208 HSD17B14Q9BPX1 270 aa27.69■■■□□ 2.02
TMEM54-205ENST00000475208 TRIM6Q9C030 488 aaPredicted RBP27.69■■■□□ 2.02
TMEM54-205ENST00000475208 NXF3Q9H4D5 531 aaKnown RBP27.69■■■□□ 2.02
TMEM54-205ENST00000475208 RXFP1Q9HBX9 757 aa27.69■■■□□ 2.02
TMEM54-205ENST00000475208 DPP7Q9UHL4 492 aa27.69■■■□□ 2.02
TMEM54-205ENST00000475208 PCDHA12Q9UN75 941 aa27.69■■■□□ 2.02
TMEM54-205ENST00000475208 GIT1Q9Y2X7 761 aa27.69■■■□□ 2.02
TMEM54-205ENST00000475208 CFAP54Q96N23 3096 aa27.69■■■□□ 2.02
TMEM54-205ENST00000475208 CCDC195A0A1B0GUA6 201 aa27.68■■■□□ 2.02
TMEM54-205ENST00000475208 NR1I2O75469 434 aa27.68■■■□□ 2.02
TMEM54-205ENST00000475208 MYBP10242 640 aa27.68■■■□□ 2.02
TMEM54-205ENST00000475208 ARF4P18085 180 aaPredicted RBP27.68■■■□□ 2.02
TMEM54-205ENST00000475208 ARL2P36404 184 aa27.68■■■□□ 2.02
TMEM54-205ENST00000475208 DSG1Q02413 1049 aa27.68■■■□□ 2.02
TMEM54-205ENST00000475208 CALCRLQ16602 461 aa27.68■■■□□ 2.02
TMEM54-205ENST00000475208 HACE1Q8IYU2 909 aa27.68■■■□□ 2.02
TMEM54-205ENST00000475208 ANKEF1Q9NU02 776 aa27.68■■■□□ 2.02
TMEM54-205ENST00000475208 TDRD15B5MCY1 1934 aaKnown RBP27.67■■■□□ 2.02
TMEM54-205ENST00000475208 N4BP1O75113 896 aaKnown RBP27.67■■■□□ 2.02
TMEM54-205ENST00000475208 NBL1P41271 181 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms