RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 OR1G1P47890 313 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 HTR4Q13639 388 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 UBXN11Q5T124 520 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 DCLRE1AQ6PJP8 1040 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 SPATA31D4Q6ZUB0 917 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 GET4Q7L5D6 327 aaPredicted RBP17.8■□□□□ 0.44
ITGB1-211ENST00000475184 COLGALT2Q8IYK4 626 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 DCLK2Q8N568 766 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 PJA1Q8NG27 643 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 TBCKQ8TEA7 893 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 HDAC7Q8WUI4 952 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 MINDY3Q9H8M7 445 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 SLC2A4RGQ9NR83 387 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 VPS54Q9P1Q0 977 aa17.8■□□□□ 0.44
ITGB1-211ENST00000475184 ANHXE9PGG2 379 aa17.79■□□□□ 0.44
ITGB1-211ENST00000475184 NCLP19338 710 aaKnown RBP17.79■□□□□ 0.44
ITGB1-211ENST00000475184 PSMC5P62195 406 aa17.79■□□□□ 0.44
ITGB1-211ENST00000475184 DSG1Q02413 1049 aa17.79■□□□□ 0.44
ITGB1-211ENST00000475184 SRGAP1Q7Z6B7 1085 aa17.79■□□□□ 0.44
ITGB1-211ENST00000475184 SLC7A3Q8WY07 619 aa17.79■□□□□ 0.44
ITGB1-211ENST00000475184 FOXQ1Q9C009 403 aa17.79■□□□□ 0.44
ITGB1-211ENST00000475184 NT5C3AQ9H0P0 336 aa17.79■□□□□ 0.44
ITGB1-211ENST00000475184 PLEKHA4Q9H4M7 779 aa17.79■□□□□ 0.44
ITGB1-211ENST00000475184 UBN1Q9NPG3 1134 aa17.79■□□□□ 0.44
ITGB1-211ENST00000475184 ZDHHC7Q9NXF8 308 aa17.79■□□□□ 0.44
ITGB1-211ENST00000475184 ARL5CA6NH57 179 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 POTEMA6NI47 508 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 TDP2O95551 362 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 C1RP00736 705 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 SRGAP2CP0DJJ0 459 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 ITGA4P13612 1032 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 GLULP15104 373 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 DSC1Q08554 894 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 POTEGQ6S5H5 508 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 PALB2Q86YC2 1186 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 SUMF1Q8NBK3 374 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 SMG8Q8ND04 991 aaKnown RBP17.78■□□□□ 0.44
ITGB1-211ENST00000475184 CNNM3Q8NE01 707 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 ETNPPLQ8TBG4 499 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 PRPF31Q8WWY3 499 aaKnown RBP17.78■□□□□ 0.44
ITGB1-211ENST00000475184 PSPC1Q8WXF1 523 aaKnown RBP17.78■□□□□ 0.44
ITGB1-211ENST00000475184 BRF1Q92994 677 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 SLC26A6Q9BXS9 759 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 RNF26Q9BY78 433 aaPredicted RBP17.78■□□□□ 0.44
ITGB1-211ENST00000475184 NUMBLQ9Y6R0 609 aa17.78■□□□□ 0.44
ITGB1-211ENST00000475184 COL4A3Q01955 1670 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 CYP3A7-CYP3A51PA0A087WV96 503 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 F8W810 466 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 TGM5O43548 720 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 GAS2O43903 313 aaKnown RBP17.77■□□□□ 0.44
ITGB1-211ENST00000475184 KINO60870 393 aaKnown RBP17.77■□□□□ 0.44
ITGB1-211ENST00000475184 CPA1P15085 419 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 CYP3A7P24462 503 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 MLH1P40692 756 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 NPEPPSP55786 919 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 LAMTOR4Q0VGL1 99 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 NTRK3Q16288 839 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 Q6ZUG5 572 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 ST13P5Q8NFI4 369 aaPredicted RBP17.77■□□□□ 0.44
ITGB1-211ENST00000475184 TMEM143Q96AN5 459 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 SHDQ96IW2 340 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 B3GALT6Q96L58 329 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 GAD1Q99259 594 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 C22orf23Q9BZE7 217 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 PRKD2Q9BZL6 878 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 CHST7Q9NS84 486 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 IPPQ9Y573 584 aa17.77■□□□□ 0.44
ITGB1-211ENST00000475184 F5P12259 2224 aa17.76■□□□□ 0.43
ITGB1-211ENST00000475184 LRRN2O75325 713 aa17.76■□□□□ 0.43
ITGB1-211ENST00000475184 NR1I2O75469 434 aa17.76■□□□□ 0.43
ITGB1-211ENST00000475184 NLRP5P59047 1200 aa17.76■□□□□ 0.43
ITGB1-211ENST00000475184 STARD6P59095 220 aa17.76■□□□□ 0.43
ITGB1-211ENST00000475184 RSPO4Q2I0M5 234 aaPredicted RBP17.76■□□□□ 0.43
ITGB1-211ENST00000475184 EXOC8Q8IYI6 725 aa17.76■□□□□ 0.43
ITGB1-211ENST00000475184 MAML2Q8IZL2 1156 aaPredicted RBP17.76■□□□□ 0.43
ITGB1-211ENST00000475184 ZFP42Q96MM3 310 aa17.76■□□□□ 0.43
ITGB1-211ENST00000475184 DHX33Q9H6R0 707 aaKnown RBP17.76■□□□□ 0.43
ITGB1-211ENST00000475184 SH3GLB2Q9NR46 395 aa17.76■□□□□ 0.43
ITGB1-211ENST00000475184 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.76■□□□□ 0.43
ITGB1-211ENST00000475184 ZFP37Q9Y6Q3 630 aaPredicted RBP17.76■□□□□ 0.43
ITGB1-211ENST00000475184 NOTCH4Q99466 2003 aa17.76■□□□□ 0.43
ITGB1-211ENST00000475184 ERLIN2O94905 339 aa17.75■□□□□ 0.43
ITGB1-211ENST00000475184 IFNAR1P17181 557 aa17.75■□□□□ 0.43
ITGB1-211ENST00000475184 QARSP47897 775 aaKnown RBP17.75■□□□□ 0.43
ITGB1-211ENST00000475184 SCNN1GP51170 649 aa17.75■□□□□ 0.43
ITGB1-211ENST00000475184 GLYCTKQ8IVS8 523 aa17.75■□□□□ 0.43
ITGB1-211ENST00000475184 GPR65Q8IYL9 337 aa17.75■□□□□ 0.43
ITGB1-211ENST00000475184 ZNF579Q8NAF0 562 aaKnown RBP17.75■□□□□ 0.43
ITGB1-211ENST00000475184 RNF149Q8NC42 400 aa17.75■□□□□ 0.43
ITGB1-211ENST00000475184 CEP170P1Q96L14 293 aa17.75■□□□□ 0.43
ITGB1-211ENST00000475184 YTHDC1Q96MU7 727 aaKnown RBP17.75■□□□□ 0.43
ITGB1-211ENST00000475184 MBOAT7Q96N66 472 aa17.75■□□□□ 0.43
ITGB1-211ENST00000475184 EIF2AQ9BY44 585 aaKnown RBP17.75■□□□□ 0.43
ITGB1-211ENST00000475184 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
ITGB1-211ENST00000475184 BMP2KQ9NSY1 1161 aaPredicted RBP17.75■□□□□ 0.43
ITGB1-211ENST00000475184 FNIP2Q9P278 1114 aa17.75■□□□□ 0.43
ITGB1-211ENST00000475184 PPME1Q9Y570 386 aa17.75■□□□□ 0.43
ITGB1-211ENST00000475184 VWA8A3KMH1 1905 aa17.74■□□□□ 0.43
ITGB1-211ENST00000475184 EML1O00423 815 aa17.74■□□□□ 0.43
ITGB1-211ENST00000475184 DKC1O60832 514 aaKnown RBP eCLIP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms