RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 IL17RAQ96F46 866 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDH23-211ENST00000475158 SNX25Q9H3E2 840 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 ACTR5Q9H9F9 607 aaPredicted RBP10.28□□□□□ -0.76
CDH23-211ENST00000475158 ZNF302Q9NR11 478 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 AGO2Q9UKV8 859 aaKnown RBP10.28□□□□□ -0.76
CDH23-211ENST00000475158 A0A0U1RQJ8 604 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 CREB3O43889 395 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 OPHN1O60890 802 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 MYBL1P10243 752 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 CYP11B2P19099 503 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 FMO5P49326 533 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 RINT1Q6NUQ1 792 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 SLC35G2Q8TBE7 412 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 RFFLQ8WZ73 363 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 PACSIN1Q9BY11 444 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 RTFDC1Q9BY42 306 aaPredicted RBP10.28□□□□□ -0.76
CDH23-211ENST00000475158 HOXC10Q9NYD6 342 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 HSPBP1Q9NZL4 362 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 PNMA2Q9UL42 364 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 H3BQF6 201 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 CYTH3O43739 400 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 NR3C2P08235 984 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 PPP4CP60510 307 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 PSMC6P62333 389 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 WDR72Q3MJ13 1102 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 BEND6Q5SZJ8 279 aaPredicted RBP10.28□□□□□ -0.76
CDH23-211ENST00000475158 RAPH1Q70E73 1250 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 ZC3H18Q86VM9 953 aaKnown RBP10.28□□□□□ -0.76
CDH23-211ENST00000475158 CCDC117Q8IWD4 279 aaPredicted RBP10.28□□□□□ -0.76
CDH23-211ENST00000475158 HACE1Q8IYU2 909 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 PDIK1LQ8N165 341 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 TMEM35BQ8NCS4 154 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 ATG4CQ96DT6 458 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 TRIM11Q96F44 468 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 RUSC1Q9BVN2 902 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 VCPKMTQ9H867 229 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 ZNF446Q9NWS9 450 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 NYAP2Q9P242 653 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 USP20Q9Y2K6 914 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 PLEKHG2Q9H7P9 1386 aa10.28□□□□□ -0.76
CDH23-211ENST00000475158 MSH4O15457 936 aa10.27□□□□□ -0.76
CDH23-211ENST00000475158 ZBED1O96006 694 aa10.27□□□□□ -0.76
CDH23-211ENST00000475158 CPP00450 1065 aa10.27□□□□□ -0.76
CDH23-211ENST00000475158 MT-ND3P03897 115 aa10.27□□□□□ -0.76
CDH23-211ENST00000475158 IREB2P48200 963 aaKnown RBP10.27□□□□□ -0.76
CDH23-211ENST00000475158 RPS6P62753 249 aaKnown RBP10.27□□□□□ -0.76
CDH23-211ENST00000475158 EZH2Q15910 746 aaKnown RBP10.27□□□□□ -0.76
CDH23-211ENST00000475158 SH2D4BQ5SQS7 431 aa10.27□□□□□ -0.76
CDH23-211ENST00000475158 NSMCE1Q8WV22 266 aa10.27□□□□□ -0.76
CDH23-211ENST00000475158 TTC17Q96AE7 1141 aa10.27□□□□□ -0.76
CDH23-211ENST00000475158 FUT8Q9BYC5 575 aa10.27□□□□□ -0.76
CDH23-211ENST00000475158 TAF1DQ9H5J8 278 aaPredicted RBP10.27□□□□□ -0.76
CDH23-211ENST00000475158 KCNH7Q9NS40 1196 aa10.27□□□□□ -0.76
CDH23-211ENST00000475158 ITSN1Q15811 1721 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 RASA4BC9J798 803 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 RASA4O43374 803 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 TPD52P55327 224 aaPredicted RBP10.27□□□□□ -0.77
CDH23-211ENST00000475158 TMEM62Q0P6H9 643 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 CUL1Q13616 776 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 ANGEL2Q5VTE6 544 aaKnown RBP10.27□□□□□ -0.77
CDH23-211ENST00000475158 TTI2Q6NXR4 508 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 FRMD5Q7Z6J6 570 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 BBOF1Q8ND07 529 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 SLC17A8Q8NDX2 589 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 ZKSCAN4Q969J2 545 aaPredicted RBP10.27□□□□□ -0.77
CDH23-211ENST00000475158 C9orf72Q96LT7 481 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 MTRQ99707 1265 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 SEMA6BQ9H3T3 888 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 ALG13Q9NP73 1137 aaKnown RBP10.27□□□□□ -0.77
CDH23-211ENST00000475158 SLC5A4Q9NY91 659 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 DMGDHQ9UI17 866 aaKnown RBP10.27□□□□□ -0.77
CDH23-211ENST00000475158 ZNRF3Q9ULT6 936 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 SYNGAP1Q96PV0 1343 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 SPDYE16A6NNV3 312 aaPredicted RBP10.27□□□□□ -0.77
CDH23-211ENST00000475158 HSPA6P17066 643 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 RPA1P27694 616 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 LMNB2Q03252 620 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 KIF22Q14807 665 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 SLMAPQ14BN4 828 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 SPDYE2Q495Y8 402 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 HHIPL2Q6UWX4 724 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 PCGF5Q86SE9 256 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 LRRC71Q8N4P6 559 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 VCX3BQ9H321 246 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 ACAD9Q9H845 621 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 JPH1Q9HDC5 661 aaPredicted RBP10.27□□□□□ -0.77
CDH23-211ENST00000475158 VCX3AQ9NNX9 186 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 RNF181Q9P0P0 153 aa10.27□□□□□ -0.77
CDH23-211ENST00000475158 H0Y3Z8 333 aa10.26□□□□□ -0.77
CDH23-211ENST00000475158 TOM1L1O75674 476 aa10.26□□□□□ -0.77
CDH23-211ENST00000475158 PLS3P13797 630 aa10.26□□□□□ -0.77
CDH23-211ENST00000475158 IRAK1P51617 712 aa10.26□□□□□ -0.77
CDH23-211ENST00000475158 SLFN12LQ6IEE8 588 aa10.26□□□□□ -0.77
CDH23-211ENST00000475158 COL23A1Q86Y22 540 aaPredicted RBP10.26□□□□□ -0.77
CDH23-211ENST00000475158 ZFPM1Q8IX07 1006 aa10.26□□□□□ -0.77
CDH23-211ENST00000475158 VGLL2Q8N8G2 317 aa10.26□□□□□ -0.77
CDH23-211ENST00000475158 AGPAT1Q99943 283 aa10.26□□□□□ -0.77
CDH23-211ENST00000475158 DDX4Q9NQI0 724 aaKnown RBP10.26□□□□□ -0.77
CDH23-211ENST00000475158 SEL1LQ9UBV2 794 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms