RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 ZPBP2Q6X784 338 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 FAM186BQ8IYM0 893 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 FZD8Q9H461 694 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 IFT122Q9HBG6 1241 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.24■■□□□ 1.15
CDHR3-210ENST00000474330 A0A087WZ62 844 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 A0A1W2PQC6 194 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 KBTBD13C9JR72 458 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 PES1O00541 588 aaKnown RBP22.24■■□□□ 1.15
CDHR3-210ENST00000474330 MAPK13O15264 365 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 PHKA2P46019 1235 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 ATN1P54259 1190 aaPredicted RBP22.24■■□□□ 1.15
CDHR3-210ENST00000474330 PTPN21Q16825 1174 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 NBPF20Q3BBV1 942 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 SLFN12LQ6IEE8 588 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 ZNF410Q86VK4 478 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 C7orf61Q8IZ16 206 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 TRIM44Q96DX7 344 aaPredicted RBP22.24■■□□□ 1.15
CDHR3-210ENST00000474330 FDXACB1Q9BRP7 624 aaPredicted RBP22.24■■□□□ 1.15
CDHR3-210ENST00000474330 PHF24Q9UPV7 400 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 ITIH6Q6UXX5 1313 aa22.24■■□□□ 1.15
CDHR3-210ENST00000474330 TREHO43280 583 aa22.23■■□□□ 1.15
CDHR3-210ENST00000474330 EDN1P05305 212 aa22.23■■□□□ 1.15
CDHR3-210ENST00000474330 PRKCBP05771 671 aa22.23■■□□□ 1.15
CDHR3-210ENST00000474330 GPC3P51654 580 aa22.23■■□□□ 1.15
CDHR3-210ENST00000474330 HS1BP3Q53T59 392 aa22.23■■□□□ 1.15
CDHR3-210ENST00000474330 FKBP15Q5T1M5 1219 aa22.23■■□□□ 1.15
CDHR3-210ENST00000474330 SLC39A5Q6ZMH5 540 aa22.23■■□□□ 1.15
CDHR3-210ENST00000474330 CCDC186Q7Z3E2 898 aa22.23■■□□□ 1.15
CDHR3-210ENST00000474330 SESTD1Q86VW0 696 aa22.23■■□□□ 1.15
CDHR3-210ENST00000474330 POMGNT1Q8WZA1 660 aa22.23■■□□□ 1.15
CDHR3-210ENST00000474330 ZNF668Q96K58 619 aaPredicted RBP22.23■■□□□ 1.15
CDHR3-210ENST00000474330 TARS2Q9BW92 718 aaKnown RBP22.23■■□□□ 1.15
CDHR3-210ENST00000474330 MRPL4Q9BYD3 311 aaKnown RBP22.23■■□□□ 1.15
CDHR3-210ENST00000474330 GTF2IRD1Q9UHL9 959 aa22.23■■□□□ 1.15
CDHR3-210ENST00000474330 ACKR2O00590 384 aa22.22■■□□□ 1.15
CDHR3-210ENST00000474330 KIAA0391O15091 583 aaKnown RBP22.22■■□□□ 1.15
CDHR3-210ENST00000474330 NLRP11P59045 1033 aaKnown RBP22.22■■□□□ 1.15
CDHR3-210ENST00000474330 MBTD1Q05BQ5 628 aa22.22■■□□□ 1.15
CDHR3-210ENST00000474330 FBXL18Q96ME1 805 aa22.22■■□□□ 1.15
CDHR3-210ENST00000474330 GLT1D1Q96MS3 346 aa22.22■■□□□ 1.15
CDHR3-210ENST00000474330 PCDH10Q9P2E7 1040 aa22.22■■□□□ 1.15
CDHR3-210ENST00000474330 COLQQ9Y215 455 aaPredicted RBP22.22■■□□□ 1.15
CDHR3-210ENST00000474330 INO80B-WBP1J3KQ70 363 aa22.21■■□□□ 1.15
CDHR3-210ENST00000474330 ZNF200P98182 395 aaPredicted RBP22.21■■□□□ 1.15
CDHR3-210ENST00000474330 TBX2Q13207 712 aaPredicted RBP22.21■■□□□ 1.15
CDHR3-210ENST00000474330 FAM187BQ17R55 369 aa22.21■■□□□ 1.15
CDHR3-210ENST00000474330 RUFY4Q6ZNE9 571 aa22.21■■□□□ 1.15
CDHR3-210ENST00000474330 ERGIC2Q96RQ1 377 aa22.21■■□□□ 1.15
CDHR3-210ENST00000474330 INO80BQ9C086 356 aaPredicted RBP22.21■■□□□ 1.15
CDHR3-210ENST00000474330 FAM49AQ9H0Q0 323 aaPredicted RBP22.21■■□□□ 1.15
CDHR3-210ENST00000474330 MINDY3Q9H8M7 445 aa22.21■■□□□ 1.15
CDHR3-210ENST00000474330 PRMT7Q9NVM4 692 aaPredicted RBP22.21■■□□□ 1.15
CDHR3-210ENST00000474330 USP20Q9Y2K6 914 aa22.21■■□□□ 1.15
CDHR3-210ENST00000474330 LAMA3Q16787 3333 aa22.21■■□□□ 1.15
CDHR3-210ENST00000474330 GSDMDP57764 484 aa22.2■■□□□ 1.15
CDHR3-210ENST00000474330 MCCD1P59942 119 aaPredicted RBP22.2■■□□□ 1.15
CDHR3-210ENST00000474330 KCNH2Q12809 1159 aa22.2■■□□□ 1.15
CDHR3-210ENST00000474330 SNX17Q15036 470 aa22.2■■□□□ 1.15
CDHR3-210ENST00000474330 INTS8Q75QN2 995 aaKnown RBP22.2■■□□□ 1.15
CDHR3-210ENST00000474330 SRGAP1Q7Z6B7 1085 aa22.2■■□□□ 1.15
CDHR3-210ENST00000474330 ZNF710Q8N1W2 664 aa22.2■■□□□ 1.15
CDHR3-210ENST00000474330 NME8Q8N427 588 aa22.2■■□□□ 1.15
CDHR3-210ENST00000474330 RDH13Q8NBN7 331 aa22.2■■□□□ 1.15
CDHR3-210ENST00000474330 NLRP7Q8WX94 980 aa22.2■■□□□ 1.15
CDHR3-210ENST00000474330 SLC35C1Q96A29 364 aa22.2■■□□□ 1.15
CDHR3-210ENST00000474330 VTI1AQ96AJ9 217 aa22.2■■□□□ 1.15
CDHR3-210ENST00000474330 ACO2Q99798 780 aaKnown RBP22.2■■□□□ 1.15
CDHR3-210ENST00000474330 ADAMTS10Q9H324 1103 aa22.2■■□□□ 1.15
CDHR3-210ENST00000474330 PRO3102Q9H379 93 aa22.2■■□□□ 1.15
CDHR3-210ENST00000474330 A0A1W2PQ45 241 aaPredicted RBP22.2■■□□□ 1.14
CDHR3-210ENST00000474330 A0A1W2PQY0 241 aa22.2■■□□□ 1.14
CDHR3-210ENST00000474330 TOM1L1O75674 476 aa22.2■■□□□ 1.14
CDHR3-210ENST00000474330 TAF2Q6P1X5 1199 aa22.2■■□□□ 1.14
CDHR3-210ENST00000474330 GPD1LQ8N335 351 aa22.2■■□□□ 1.14
CDHR3-210ENST00000474330 ZSWIM2Q8NEG5 633 aa22.2■■□□□ 1.14
CDHR3-210ENST00000474330 DNAJB3Q8WWF6 145 aa22.2■■□□□ 1.14
CDHR3-210ENST00000474330 KIAA1586Q9HCI6 787 aa22.2■■□□□ 1.14
CDHR3-210ENST00000474330 ZMYND8Q9ULU4 1186 aaPredicted RBP22.2■■□□□ 1.14
CDHR3-210ENST00000474330 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.2■■□□□ 1.14
CDHR3-210ENST00000474330 SZT2Q5T011 3432 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 LAMA2P24043 3122 aaKnown RBP22.19■■□□□ 1.14
CDHR3-210ENST00000474330 GRIN2DO15399 1336 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 A0A0B4J269 797 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 TTLL13PA6NNM8 815 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 GPR32O75388 356 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 IQCF3P0C7M6 154 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 SYN1P17600 705 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 BFSP1Q12934 665 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 PRPF4BQ13523 1007 aaKnown RBP22.19■■□□□ 1.14
CDHR3-210ENST00000474330 HSP90AA2PQ14568 343 aaPredicted RBP22.19■■□□□ 1.14
CDHR3-210ENST00000474330 SNRNP35Q16560 246 aaKnown RBP22.19■■□□□ 1.14
CDHR3-210ENST00000474330 FAM47CQ5HY64 1035 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 SAAL1Q96ER3 474 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 ZBTB45Q96K62 511 aaPredicted RBP22.19■■□□□ 1.14
CDHR3-210ENST00000474330 PRIMPOLQ96LW4 560 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 PPP1R16BQ96T49 567 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 HAPLN2Q9GZV7 340 aa22.19■■□□□ 1.14
CDHR3-210ENST00000474330 AGO2Q9UKV8 859 aaKnown RBP22.19■■□□□ 1.14
CDHR3-210ENST00000474330 GOLGA8IPA6NC78 632 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms