RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 PRPF3O43395 683 aaKnown RBP22.57■■□□□ 1.2
APP-215ENST00000474136 GLUD1P00367 558 aa22.57■■□□□ 1.2
APP-215ENST00000474136 ADH1AP07327 375 aa22.57■■□□□ 1.2
APP-215ENST00000474136 UBXN11Q5T124 520 aa22.57■■□□□ 1.2
APP-215ENST00000474136 GPR179Q6PRD1 2367 aa22.57■■□□□ 1.2
APP-215ENST00000474136 POTEGQ6S5H5 508 aa22.57■■□□□ 1.2
APP-215ENST00000474136 IPO9Q96P70 1041 aaKnown RBP22.57■■□□□ 1.2
APP-215ENST00000474136 MINDY3Q9H8M7 445 aa22.57■■□□□ 1.2
APP-215ENST00000474136 VPS54Q9P1Q0 977 aa22.57■■□□□ 1.2
APP-215ENST00000474136 F8W810 466 aa22.57■■□□□ 1.2
APP-215ENST00000474136 HOXA11P31270 313 aaPredicted RBP22.57■■□□□ 1.2
APP-215ENST00000474136 PUM1Q14671 1186 aaKnown RBP eCLIP22.57■■□□□ 1.2
APP-215ENST00000474136 B3GNT9Q6UX72 402 aa22.57■■□□□ 1.2
APP-215ENST00000474136 ANO5Q75V66 913 aa22.57■■□□□ 1.2
APP-215ENST00000474136 RDM1Q8NG50 284 aa22.57■■□□□ 1.2
APP-215ENST00000474136 BICD2Q8TD16 824 aa22.57■■□□□ 1.2
APP-215ENST00000474136 ARHGEF3Q9NR81 526 aa22.57■■□□□ 1.2
APP-215ENST00000474136 KANSL3Q9P2N6 904 aa22.57■■□□□ 1.2
APP-215ENST00000474136 SIT1Q9Y3P8 196 aa22.57■■□□□ 1.2
APP-215ENST00000474136 CCDC196A0A1B0GTZ2 297 aa22.56■■□□□ 1.2
APP-215ENST00000474136 POTEMA6NI47 508 aa22.56■■□□□ 1.2
APP-215ENST00000474136 LRRN2O75325 713 aa22.56■■□□□ 1.2
APP-215ENST00000474136 CD2BP2O95400 341 aaKnown RBP22.56■■□□□ 1.2
APP-215ENST00000474136 TDP2O95551 362 aa22.56■■□□□ 1.2
APP-215ENST00000474136 GLULP15104 373 aa22.56■■□□□ 1.2
APP-215ENST00000474136 OR1G1P47890 313 aa22.56■■□□□ 1.2
APP-215ENST00000474136 USP11P51784 963 aa22.56■■□□□ 1.2
APP-215ENST00000474136 KIAA0319Q5VV43 1072 aa22.56■■□□□ 1.2
APP-215ENST00000474136 PHLDB3Q6NSJ2 640 aa22.56■■□□□ 1.2
APP-215ENST00000474136 CYP26C1Q6V0L0 522 aa22.56■■□□□ 1.2
APP-215ENST00000474136 C1orf210Q8IVY1 113 aa22.56■■□□□ 1.2
APP-215ENST00000474136 COLGALT2Q8IYK4 626 aa22.56■■□□□ 1.2
APP-215ENST00000474136 RHOBTB2Q9BYZ6 727 aa22.56■■□□□ 1.2
APP-215ENST00000474136 FOXQ1Q9C009 403 aa22.56■■□□□ 1.2
APP-215ENST00000474136 CNTNAP2Q9UHC6 1331 aa22.55■■□□□ 1.2
APP-215ENST00000474136 LAMP2P13473 410 aa22.55■■□□□ 1.2
APP-215ENST00000474136 GLUD2P49448 558 aa22.55■■□□□ 1.2
APP-215ENST00000474136 GET4Q7L5D6 327 aaPredicted RBP22.55■■□□□ 1.2
APP-215ENST00000474136 PALB2Q86YC2 1186 aa22.55■■□□□ 1.2
APP-215ENST00000474136 RNF168Q8IYW5 571 aaPredicted RBP22.55■■□□□ 1.2
APP-215ENST00000474136 ZNF579Q8NAF0 562 aaKnown RBP22.55■■□□□ 1.2
APP-215ENST00000474136 TBCKQ8TEA7 893 aa22.55■■□□□ 1.2
APP-215ENST00000474136 RUBCNQ92622 972 aa22.55■■□□□ 1.2
APP-215ENST00000474136 NXPE3Q969Y0 559 aa22.55■■□□□ 1.2
APP-215ENST00000474136 TMX3Q96JJ7 454 aa22.55■■□□□ 1.2
APP-215ENST00000474136 B3GALT6Q96L58 329 aa22.55■■□□□ 1.2
APP-215ENST00000474136 PIDD1Q9HB75 910 aa22.55■■□□□ 1.2
APP-215ENST00000474136 RXFP1Q9HBX9 757 aa22.55■■□□□ 1.2
APP-215ENST00000474136 SSX2IPQ9Y2D8 614 aa22.55■■□□□ 1.2
APP-215ENST00000474136 COL4A3BPQ9Y5P4 624 aa22.55■■□□□ 1.2
APP-215ENST00000474136 DOCK8Q8NF50 2099 aa22.54■■□□□ 1.2
APP-215ENST00000474136 EFEMP2O95967 443 aa22.54■■□□□ 1.2
APP-215ENST00000474136 SRGAP2CP0DJJ0 459 aa22.54■■□□□ 1.2
APP-215ENST00000474136 NPEPPSP55786 919 aa22.54■■□□□ 1.2
APP-215ENST00000474136 Q4G0T1 1027 aa22.54■■□□□ 1.2
APP-215ENST00000474136 DCLRE1AQ6PJP8 1040 aa22.54■■□□□ 1.2
APP-215ENST00000474136 ZC3H14Q6PJT7 736 aaKnown RBP22.54■■□□□ 1.2
APP-215ENST00000474136 SMG8Q8ND04 991 aaKnown RBP22.54■■□□□ 1.2
APP-215ENST00000474136 CCDC148Q8NFR7 591 aa22.54■■□□□ 1.2
APP-215ENST00000474136 TMEM143Q96AN5 459 aa22.54■■□□□ 1.2
APP-215ENST00000474136 NT5C3AQ9H0P0 336 aa22.54■■□□□ 1.2
APP-215ENST00000474136 SLKQ9H2G2 1235 aaPredicted RBP22.54■■□□□ 1.2
APP-215ENST00000474136 DLL3Q9NYJ7 618 aa22.54■■□□□ 1.2
APP-215ENST00000474136 TPCN1Q9ULQ1 816 aa22.54■■□□□ 1.2
APP-215ENST00000474136 CACNA1BQ00975 2339 aa22.53■■□□□ 1.2
APP-215ENST00000474136 ANHXE9PGG2 379 aa22.53■■□□□ 1.2
APP-215ENST00000474136 HSP90AA1P07900 732 aaKnown RBP22.53■■□□□ 1.2
APP-215ENST00000474136 NCLP19338 710 aaKnown RBP22.53■■□□□ 1.2
APP-215ENST00000474136 AKAP17AQ02040 695 aaKnown RBP22.53■■□□□ 1.2
APP-215ENST00000474136 HTR4Q13639 388 aa22.53■■□□□ 1.2
APP-215ENST00000474136 ELMSAN1Q6PJG2 1045 aa22.53■■□□□ 1.2
APP-215ENST00000474136 GLYCTKQ8IVS8 523 aa22.53■■□□□ 1.2
APP-215ENST00000474136 MAML2Q8IZL2 1156 aaPredicted RBP22.53■■□□□ 1.2
APP-215ENST00000474136 PRPF31Q8WWY3 499 aaKnown RBP22.53■■□□□ 1.2
APP-215ENST00000474136 RPP25Q9BUL9 199 aaKnown RBP22.53■■□□□ 1.2
APP-215ENST00000474136 SLC26A6Q9BXS9 759 aa22.53■■□□□ 1.2
APP-215ENST00000474136 RNF39Q9H2S5 420 aa22.53■■□□□ 1.2
APP-215ENST00000474136 BMP2KQ9NSY1 1161 aaPredicted RBP22.53■■□□□ 1.2
APP-215ENST00000474136 MIOSQ9NXC5 875 aa22.53■■□□□ 1.2
APP-215ENST00000474136 DPP7Q9UHL4 492 aa22.53■■□□□ 1.2
APP-215ENST00000474136 NUMBLQ9Y6R0 609 aa22.53■■□□□ 1.2
APP-215ENST00000474136 CACNA1IQ9P0X4 2223 aa22.52■■□□□ 1.2
APP-215ENST00000474136 EML1O00423 815 aa22.52■■□□□ 1.2
APP-215ENST00000474136 GAS2O43903 313 aaKnown RBP22.52■■□□□ 1.2
APP-215ENST00000474136 PDIA3P30101 505 aaKnown RBP22.52■■□□□ 1.2
APP-215ENST00000474136 PSMC5P62195 406 aa22.52■■□□□ 1.2
APP-215ENST00000474136 DSG1Q02413 1049 aa22.52■■□□□ 1.2
APP-215ENST00000474136 NTRK3Q16288 839 aa22.52■■□□□ 1.2
APP-215ENST00000474136 SRGAP1Q7Z6B7 1085 aa22.52■■□□□ 1.2
APP-215ENST00000474136 SUMF1Q8NBK3 374 aa22.52■■□□□ 1.2
APP-215ENST00000474136 PJA1Q8NG27 643 aa22.52■■□□□ 1.2
APP-215ENST00000474136 INTS4Q96HW7 963 aaKnown RBP22.52■■□□□ 1.2
APP-215ENST00000474136 GAD1Q99259 594 aa22.52■■□□□ 1.2
APP-215ENST00000474136 JPH2Q9BR39 696 aaPredicted RBP22.52■■□□□ 1.2
APP-215ENST00000474136 EIF2AQ9BY44 585 aaKnown RBP22.52■■□□□ 1.2
APP-215ENST00000474136 SLC2A4RGQ9NR83 387 aa22.52■■□□□ 1.2
APP-215ENST00000474136 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.52■■□□□ 1.2
APP-215ENST00000474136 ARL5CA6NH57 179 aa22.51■■□□□ 1.19
APP-215ENST00000474136 TGM5O43548 720 aa22.51■■□□□ 1.19
APP-215ENST00000474136 PFKFB2O60825 505 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms