RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 NR3C1P04150 777 aa16.13■□□□□ 0.17
LMNA-213ENST00000473598 SCP2P22307 547 aa16.13■□□□□ 0.17
LMNA-213ENST00000473598 RPL13P26373 211 aaKnown RBP16.13■□□□□ 0.17
LMNA-213ENST00000473598 PTPN21Q16825 1174 aa16.13■□□□□ 0.17
LMNA-213ENST00000473598 ERCC6LQ2NKX8 1250 aa16.13■□□□□ 0.17
LMNA-213ENST00000473598 E4F1Q66K89 784 aaPredicted RBP16.13■□□□□ 0.17
LMNA-213ENST00000473598 SPECC1LQ69YQ0 1117 aa16.13■□□□□ 0.17
LMNA-213ENST00000473598 EFCAB12Q6NXP0 572 aa16.13■□□□□ 0.17
LMNA-213ENST00000473598 MAP4K3Q8IVH8 894 aa16.13■□□□□ 0.17
LMNA-213ENST00000473598 LRRC71Q8N4P6 559 aa16.13■□□□□ 0.17
LMNA-213ENST00000473598 RETREG2Q8NC44 543 aa16.13■□□□□ 0.17
LMNA-213ENST00000473598 PRPF31Q8WWY3 499 aaKnown RBP16.13■□□□□ 0.17
LMNA-213ENST00000473598 TUBGCP2Q9BSJ2 902 aa16.13■□□□□ 0.17
LMNA-213ENST00000473598 UPF3AQ9H1J1 476 aaKnown RBP16.13■□□□□ 0.17
LMNA-213ENST00000473598 AGPAT3Q9NRZ7 376 aa16.13■□□□□ 0.17
LMNA-213ENST00000473598 N4BP3O15049 544 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 CLIC2O15247 247 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 GNA14O95837 355 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 MYL3P08590 195 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 RARBP10826 455 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 KLRC1P26715 233 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 MTIF2P46199 727 aaKnown RBP16.12■□□□□ 0.17
LMNA-213ENST00000473598 MARSP56192 900 aaKnown RBP16.12■□□□□ 0.17
LMNA-213ENST00000473598 PPFIA1Q13136 1202 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 MXD4Q14582 209 aaPredicted RBP16.12■□□□□ 0.17
LMNA-213ENST00000473598 LHX8Q68G74 356 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 LEKR1Q6ZMV7 388 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 REXO1L1PQ8IX06 675 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 PSPC1Q8WXF1 523 aaKnown RBP16.12■□□□□ 0.17
LMNA-213ENST00000473598 EXOC7Q9UPT5 735 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 LRRIQ4A6NIV6 560 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 HAS3O00219 553 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 TEX33O43247 280 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 C6orf222P0C671 652 aaPredicted RBP16.12■□□□□ 0.17
LMNA-213ENST00000473598 DNM2P50570 870 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 SNRPFP62306 86 aaKnown RBP16.12■□□□□ 0.17
LMNA-213ENST00000473598 NKX3-2P78367 333 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 CAPSQ13938 189 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 GRIK4Q16099 956 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 KIAA0753Q2KHM9 967 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 ARHGAP29Q52LW3 1261 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 METTL13Q8N6R0 699 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 DEPTORQ8TB45 409 aa16.12■□□□□ 0.17
LMNA-213ENST00000473598 SUCLA2Q9P2R7 463 aaPredicted RBP16.12■□□□□ 0.17
LMNA-213ENST00000473598 DDX20Q9UHI6 824 aaKnown RBP16.12■□□□□ 0.17
LMNA-213ENST00000473598 MYADML2A6NDP7 307 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 PURAQ00577 322 aaKnown RBP16.11■□□□□ 0.17
LMNA-213ENST00000473598 LAMTOR4Q0VGL1 99 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 MFSD10Q14728 455 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 CCDC40Q4G0X9 1142 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 MTHFD1LQ6UB35 978 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 TAS1R3Q7RTX0 852 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 LINC01465Q8N7H1 131 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 U2AF1L4Q8WU68 220 aaKnown RBP16.11■□□□□ 0.17
LMNA-213ENST00000473598 TMEM174Q8WUU8 243 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 ZBTB10Q96DT7 871 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 SPC25Q9HBM1 224 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 TRMT1Q9NXH9 659 aaKnown RBP16.11■□□□□ 0.17
LMNA-213ENST00000473598 TRIP12Q14669 1992 aaPredicted RBP16.11■□□□□ 0.17
LMNA-213ENST00000473598 RRN3P2A6NIE6 340 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 KPNA6O60684 536 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 PSEN2P49810 448 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 CORO7P57737 925 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 MYBPC2Q14324 1141 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 MARCH8Q5T0T0 291 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 SLC9A9Q8IVB4 645 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 C12orf56Q8IXR9 622 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 NOC4LQ9BVI4 516 aaKnown RBP16.11■□□□□ 0.17
LMNA-213ENST00000473598 KATNAL1Q9BW62 490 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 DMAC2Q9NW81 257 aa16.11■□□□□ 0.17
LMNA-213ENST00000473598 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.11■□□□□ 0.173e-11■□□□□ 11
LMNA-213ENST00000473598 NRCAMQ92823 1304 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 SCN10AQ9Y5Y9 1956 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 LGALS16A8MUM7 142 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 SLC16A3O15427 465 aaKnown RBP16.1■□□□□ 0.17
LMNA-213ENST00000473598 ASAP2O43150 1006 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 AKAP3O75969 853 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 PGK1P00558 417 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 GJB1P08034 283 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 SMIM10L2AP0DMW4 78 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 SMIM10L2BP0DMW5 78 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 CALRP27797 417 aaKnown RBP16.1■□□□□ 0.17
LMNA-213ENST00000473598 PBX1P40424 430 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 CLCN3P51790 818 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 SMC1AQ14683 1233 aaKnown RBP16.1■□□□□ 0.17
LMNA-213ENST00000473598 MAN2A1Q16706 1144 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 GNASQ5JWF2 1037 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 MIIPQ5JXC2 388 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 RHPN2Q8IUC4 686 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 TACO1Q9BSH4 297 aaKnown RBP16.1■□□□□ 0.17
LMNA-213ENST00000473598 TMEM106CQ9BVX2 250 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 TMEM134Q9H6X4 195 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 SETD4Q9NVD3 440 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 FRMPD3Q5JV73 1810 aa16.1■□□□□ 0.17
LMNA-213ENST00000473598 EIF3CLB5ME19 914 aaKnown RBP16.09■□□□□ 0.17
LMNA-213ENST00000473598 TISP43B9A030 160 aa16.09■□□□□ 0.17
LMNA-213ENST00000473598 K7ERI5 159 aa16.09■□□□□ 0.17
LMNA-213ENST00000473598 ADAMTS4O75173 837 aa16.09■□□□□ 0.17
LMNA-213ENST00000473598 EN2P19622 333 aaPredicted RBP16.09■□□□□ 0.17
LMNA-213ENST00000473598 TMOD1P28289 359 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms