RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 ZNF233A6NK53 670 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 PMM2O15305 246 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 ARHGAP6O43182 974 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 TOM1L1O75674 476 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 SKILP12757 684 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 ADSSP30520 456 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 KRT9P35527 623 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 ZBED6P86452 979 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 BEX3Q00994 111 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 ARID5BQ14865 1188 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 SNRNP35Q16560 246 aaKnown RBP13.97□□□□□ -0.17
VPS13D-205ENST00000473099 EXOC3L4Q17RC7 722 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 MARCH8Q5T0T0 291 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 SRGAP1Q7Z6B7 1085 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 ZNF296Q8WUU4 475 aaPredicted RBP13.97□□□□□ -0.17
VPS13D-205ENST00000473099 ZNF830Q96NB3 372 aaPredicted RBP13.97□□□□□ -0.17
VPS13D-205ENST00000473099 BAG1Q99933 345 aaPredicted RBP13.97□□□□□ -0.17
VPS13D-205ENST00000473099 TTYH3Q9C0H2 523 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 IKZF4Q9H2S9 585 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 TMX1Q9H3N1 280 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 FZD8Q9H461 694 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 MMRN2Q9H8L6 949 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 PLCB1Q9NQ66 1216 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 SETD4Q9NVD3 440 aa13.97□□□□□ -0.17
VPS13D-205ENST00000473099 AGO2Q9UKV8 859 aaKnown RBP13.97□□□□□ -0.17
VPS13D-205ENST00000473099 TTC26A0AVF1 554 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 C17orf102A2RUQ5 167 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 TISP43B9A030 160 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 INO80B-WBP1J3KQ70 363 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 CLDN3O15551 220 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 CCP110O43303 1012 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 ADAMTS4O75173 837 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 CABYRO75952 493 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 ELNP15502 786 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 FECHP22830 423 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 HOXC8P31273 242 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 GTF2H1P32780 548 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 MATR3P43243 847 aaKnown RBP eCLIP13.96□□□□□ -0.17
VPS13D-205ENST00000473099 FMO5P49326 533 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 ADKP55263 362 aaKnown RBP13.96□□□□□ -0.17
VPS13D-205ENST00000473099 ADAM17P78536 824 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 LRMPQ12912 555 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 KYAT1Q16773 422 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 APBB1IPQ7Z5R6 666 aaPredicted RBP13.96□□□□□ -0.17
VPS13D-205ENST00000473099 FMNL3Q8IVF7 1028 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 NME8Q8N427 588 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 C7orf31Q8N865 590 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 KLHDC9Q8NEP7 349 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 OR8K1Q8NGG5 319 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 MFSD14AQ96MC6 490 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 ACO2Q99798 780 aaKnown RBP13.96□□□□□ -0.17
VPS13D-205ENST00000473099 TARS2Q9BW92 718 aaKnown RBP13.96□□□□□ -0.17
VPS13D-205ENST00000473099 INO80BQ9C086 356 aaPredicted RBP13.96□□□□□ -0.17
VPS13D-205ENST00000473099 ABHD10Q9NUJ1 306 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 ZNHIT6Q9NWK9 470 aaKnown RBP13.96□□□□□ -0.17
VPS13D-205ENST00000473099 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.96□□□□□ -0.17
VPS13D-205ENST00000473099 CEP72Q9P209 647 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 DDX20Q9UHI6 824 aaKnown RBP13.96□□□□□ -0.17
VPS13D-205ENST00000473099 FBXL5Q9UKA1 691 aa13.96□□□□□ -0.17
VPS13D-205ENST00000473099 A0A0B4J269 797 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 ZNF500O60304 480 aaPredicted RBP13.95□□□□□ -0.18
VPS13D-205ENST00000473099 CYP2C9P11712 490 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 KCNA4P22459 653 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 RFX1P22670 979 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 CCND3P30281 292 aaPredicted RBP13.95□□□□□ -0.18
VPS13D-205ENST00000473099 FXR1P51114 621 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS13D-205ENST00000473099 GPC3P51654 580 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 CAP1Q01518 475 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 POU5F1Q01860 360 aaKnown RBP13.95□□□□□ -0.18
VPS13D-205ENST00000473099 MBTD1Q05BQ5 628 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 CYP24A1Q07973 514 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 KCNMA1Q12791 1236 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 TRIM32Q13049 653 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 PRPF4BQ13523 1007 aaKnown RBP13.95□□□□□ -0.18
VPS13D-205ENST00000473099 SURF1Q15526 300 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 PTPN21Q16825 1174 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 TAF2Q6P1X5 1199 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 TSHZ1Q6ZSZ6 1077 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 CACNA2D4Q7Z3S7 1137 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 RNF180Q86T96 592 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 SESTD1Q86VW0 696 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 TMTC1Q8IUR5 882 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 KIAA0319LQ8IZA0 1049 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 RDH13Q8NBN7 331 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 KIAA1524Q8TCG1 905 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 CPLX3Q8WVH0 158 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 NLRP7Q8WX94 980 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 VTI1AQ96AJ9 217 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 SCLT1Q96NL6 688 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 DNAJC7Q99615 494 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 MSTO1Q9BUK6 570 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 GCOM2Q9BZD3 368 aaPredicted RBP13.95□□□□□ -0.18
VPS13D-205ENST00000473099 IFT122Q9HBG6 1241 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 MYO6Q9UM54 1294 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 TNFSF13BQ9Y275 285 aa13.95□□□□□ -0.18
VPS13D-205ENST00000473099 CNTNAP2Q9UHC6 1331 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 A0A087WZ62 844 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 CCDC85CA6NKD9 419 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 OGTO15294 1046 aa13.94□□□□□ -0.18
VPS13D-205ENST00000473099 PGK1P00558 417 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms