RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 PCDHGA2Q9Y5H1 932 aa9.22□□□□□ -0.93
SGCE-210ENST00000472326 AKR1B10O60218 316 aa9.21□□□□□ -0.94
SGCE-210ENST00000472326 HIBADHP31937 336 aaKnown RBP9.21□□□□□ -0.94
SGCE-210ENST00000472326 HHEXQ03014 270 aa9.21□□□□□ -0.94
SGCE-210ENST00000472326 PRKD1Q15139 912 aaPredicted RBP9.21□□□□□ -0.94
SGCE-210ENST00000472326 SPDYAQ5MJ70 313 aa9.21□□□□□ -0.94
SGCE-210ENST00000472326 FATE1Q969F0 183 aa9.21□□□□□ -0.94
SGCE-210ENST00000472326 MPHOSPH9Q99550 1183 aa9.21□□□□□ -0.94
SGCE-210ENST00000472326 MKS1Q9NXB0 559 aa9.21□□□□□ -0.94
SGCE-210ENST00000472326 NOP58Q9Y2X3 529 aaKnown RBP9.21□□□□□ -0.94
SGCE-210ENST00000472326 TSC22D4Q9Y3Q8 395 aa9.21□□□□□ -0.94
SGCE-210ENST00000472326 TRIM75PA6NK02 468 aa9.2□□□□□ -0.94
SGCE-210ENST00000472326 WNT3AP56704 352 aa9.2□□□□□ -0.94
SGCE-210ENST00000472326 MBNL2Q5VZF2 373 aaKnown RBP9.2□□□□□ -0.94
SGCE-210ENST00000472326 RPUSD2Q8IZ73 545 aaKnown RBP9.2□□□□□ -0.94
SGCE-210ENST00000472326 PPM1NQ8N819 430 aa9.2□□□□□ -0.94
SGCE-210ENST00000472326 MB21D1Q8N884 522 aa9.2□□□□□ -0.94
SGCE-210ENST00000472326 CDK5RAP1Q96SZ6 601 aaKnown RBP9.2□□□□□ -0.94
SGCE-210ENST00000472326 BRINP2Q9C0B6 783 aa9.2□□□□□ -0.94
SGCE-210ENST00000472326 HOMER2Q9NSB8 354 aa9.2□□□□□ -0.94
SGCE-210ENST00000472326 SCOCQ9UIL1 159 aa9.2□□□□□ -0.94
SGCE-210ENST00000472326 RPTORQ8N122 1335 aa9.2□□□□□ -0.94
SGCE-210ENST00000472326 ADCY6O43306 1168 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 ITGA10O75578 1167 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 INSRRP14616 1297 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 GYPEP15421 78 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 AGXTP21549 392 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 SLC5A3P53794 718 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 PPP3CAQ08209 521 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 ACAP2Q15057 778 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 PCBP2Q15366 365 aaKnown RBP eCLIP9.19□□□□□ -0.94
SGCE-210ENST00000472326 C19orf54Q5BKX5 351 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 MUM1L1Q5H9M0 696 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 SH3RF3Q8TEJ3 882 aaPredicted RBP9.19□□□□□ -0.94
SGCE-210ENST00000472326 FAXDC2Q96IV6 333 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 ASPSCR1Q9BZE9 553 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 ZNF277Q9NRM2 450 aaPredicted RBP9.19□□□□□ -0.94
SGCE-210ENST00000472326 GPRC5DQ9NZD1 345 aa9.19□□□□□ -0.94
SGCE-210ENST00000472326 hCG_2014768A0A024R1R8 64 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 HOXA3O43365 443 aaPredicted RBP9.18□□□□□ -0.94
SGCE-210ENST00000472326 PCDHGA12O60330 932 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 MALLQ13021 153 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 ZMYM3Q14202 1370 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 SPRED1Q7Z699 444 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 GPR156Q8NFN8 814 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 MDM1Q8TC05 714 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 ZNF480Q8WV37 535 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 IL17RAQ96F46 866 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 PAWRQ96IZ0 340 aaKnown RBP9.18□□□□□ -0.94
SGCE-210ENST00000472326 GREM2Q9H772 168 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 ZBTB21Q9ULJ3 1066 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 PCDHGA9Q9Y5G4 932 aaKnown RBP9.18□□□□□ -0.94
SGCE-210ENST00000472326 PCDHGA8Q9Y5G5 932 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 PCDHGA7Q9Y5G6 932 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 PCDHGA6Q9Y5G7 932 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 PCDHGA3Q9Y5H0 932 aa9.18□□□□□ -0.94
SGCE-210ENST00000472326 TNKSO95271 1327 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 FZD9O00144 591 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 XPOTO43592 962 aaKnown RBP9.17□□□□□ -0.94
SGCE-210ENST00000472326 GZMKP49863 264 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 NOMO1Q15155 1222 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 MST1LQ2TV78 715 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 ANO4Q32M45 955 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 BRDTQ58F21 947 aaPredicted RBP9.17□□□□□ -0.94
SGCE-210ENST00000472326 Q6ZRM9 215 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 Q6ZVL8 140 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 REPS2Q8NFH8 660 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 FBXO18Q8NFZ0 1043 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 JADE3Q92613 823 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 MIEF2Q96C03 454 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 FUBP3Q96I24 572 aaKnown RBP eCLIP9.17□□□□□ -0.94
SGCE-210ENST00000472326 CDC5LQ99459 802 aaKnown RBP9.17□□□□□ -0.94
SGCE-210ENST00000472326 ADI1Q9BV57 179 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 DNM3Q9UQ16 869 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 TESMINQ9Y4I5 508 aa9.17□□□□□ -0.94
SGCE-210ENST00000472326 RBP3P10745 1247 aa9.16□□□□□ -0.94
SGCE-210ENST00000472326 GSPT1P15170 499 aaKnown RBP9.16□□□□□ -0.94
SGCE-210ENST00000472326 MRPL49Q13405 166 aaKnown RBP9.16□□□□□ -0.94
SGCE-210ENST00000472326 PTPN21Q16825 1174 aa9.16□□□□□ -0.94
SGCE-210ENST00000472326 MFSD5Q6N075 450 aa9.16□□□□□ -0.94
SGCE-210ENST00000472326 XYLT1Q86Y38 959 aa9.16□□□□□ -0.94
SGCE-210ENST00000472326 ANKRD35Q8N283 1001 aa9.16□□□□□ -0.94
SGCE-210ENST00000472326 EXTL1Q92935 676 aa9.16□□□□□ -0.94
SGCE-210ENST00000472326 PGBD4Q96DM1 585 aa9.16□□□□□ -0.94
SGCE-210ENST00000472326 RBM12Q9NTZ6 932 aaKnown RBP9.16□□□□□ -0.94
SGCE-210ENST00000472326 TRPS1Q9UHF7 1281 aa9.16□□□□□ -0.94
SGCE-210ENST00000472326 SHTN1A0MZ66 631 aa9.15□□□□□ -0.94
SGCE-210ENST00000472326 PHF2O75151 1096 aa9.15□□□□□ -0.94
SGCE-210ENST00000472326 GNAT2P19087 354 aa9.15□□□□□ -0.94
SGCE-210ENST00000472326 MCAMP43121 646 aa9.15□□□□□ -0.94
SGCE-210ENST00000472326 ANAPC15P60006 121 aa9.15□□□□□ -0.94
SGCE-210ENST00000472326 APBA1Q02410 837 aa9.15□□□□□ -0.94
SGCE-210ENST00000472326 CRHR2Q13324 411 aa9.15□□□□□ -0.94
SGCE-210ENST00000472326 USP39Q53GS9 565 aaKnown RBP9.15□□□□□ -0.94
SGCE-210ENST00000472326 PRAMEF14Q5SWL7 426 aa9.15□□□□□ -0.94
SGCE-210ENST00000472326 ATXN2LQ8WWM7 1075 aaKnown RBP9.15□□□□□ -0.94
SGCE-210ENST00000472326 GIT1Q9Y2X7 761 aa9.15□□□□□ -0.94
SGCE-210ENST00000472326 PLSCR1O15162 318 aa9.14□□□□□ -0.95
SGCE-210ENST00000472326 HK1P19367 917 aa9.14□□□□□ -0.95
SGCE-210ENST00000472326 ECHS1P30084 290 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms