RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 RAB27AP51159 221 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 PSMD2Q13200 908 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 PNOCQ13519 176 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 ALCAMQ13740 583 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 KMT5BQ4FZB7 885 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 FAM26FQ5R3K3 315 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 EEF1DP3Q658K8 133 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 FAM117BQ6P1L5 589 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 ZPBP2Q6X784 338 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 MRPL10Q7Z7H8 261 aaKnown RBP13.53□□□□□ -0.24
PRKCB-205ENST00000472066 ZNF598Q86UK7 904 aaKnown RBP13.53□□□□□ -0.24
PRKCB-205ENST00000472066 MAP4K3Q8IVH8 894 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 HVCN1Q96D96 273 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 ZBED2Q9BTP6 218 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 PTPRHQ9HD43 1115 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 HOOK1Q9UJC3 728 aaKnown RBP13.53□□□□□ -0.24
PRKCB-205ENST00000472066 LRFN2Q9ULH4 789 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 TNFSF13BQ9Y275 285 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 PCDHB2Q9Y5E7 798 aa13.53□□□□□ -0.24
PRKCB-205ENST00000472066 DGKIO75912 1065 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 NPTXRO95502 500 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 PIGRP01833 764 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 ATF7P17544 494 aaPredicted RBP13.52□□□□□ -0.25
PRKCB-205ENST00000472066 RABGGTBP53611 331 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 HTRA4P83105 476 aaPredicted RBP13.52□□□□□ -0.25
PRKCB-205ENST00000472066 SMAD3P84022 425 aaKnown RBP13.52□□□□□ -0.25
PRKCB-205ENST00000472066 KCNA1Q09470 495 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 L1TD1Q5T7N2 865 aaKnown RBP13.52□□□□□ -0.25
PRKCB-205ENST00000472066 STXBP4Q6ZWJ1 553 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 EPM2AIP1Q7L775 607 aaPredicted RBP13.52□□□□□ -0.25
PRKCB-205ENST00000472066 SMG8Q8ND04 991 aaKnown RBP13.52□□□□□ -0.25
PRKCB-205ENST00000472066 GLIS3Q8NEA6 775 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 ZNF507Q8TCN5 953 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 CCDC47Q96A33 483 aaKnown RBP13.52□□□□□ -0.25
PRKCB-205ENST00000472066 ACCSQ96QU6 501 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 RAD9AQ99638 391 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 SLC39A2Q9NP94 309 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 EXOC1Q9NV70 894 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 TET1Q8NFU7 2136 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 PDE4DIPQ5VU43 2346 aa13.52□□□□□ -0.25
PRKCB-205ENST00000472066 ABLIM1O14639 778 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 TLL1O43897 1013 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 TOM1L1O75674 476 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 PRPF6O94906 941 aaKnown RBP13.51□□□□□ -0.25
PRKCB-205ENST00000472066 RHOBTB3O94955 611 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 PROZP22891 400 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 LIG4P49917 911 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 STK4Q13043 487 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 KCNB1Q14721 858 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 HABP4Q5JVS0 413 aaKnown RBP13.51□□□□□ -0.25
PRKCB-205ENST00000472066 RNF169Q8NCN4 708 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 SPATA20Q8TB22 786 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 ERCC4Q92889 916 aaPredicted RBP13.51□□□□□ -0.25
PRKCB-205ENST00000472066 ZNF689Q96CS4 500 aaPredicted RBP13.51□□□□□ -0.25
PRKCB-205ENST00000472066 PGBD4Q96DM1 585 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 BICD1Q96G01 975 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 ZBTB45Q96K62 511 aaPredicted RBP13.51□□□□□ -0.25
PRKCB-205ENST00000472066 ADPGKQ9BRR6 497 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 TCHPQ9BT92 498 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 PBX4Q9BYU1 374 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 TRIM6Q9C030 488 aaPredicted RBP13.51□□□□□ -0.25
PRKCB-205ENST00000472066 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 IPPQ9Y573 584 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 INSL6Q9Y581 213 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 PCDHA5Q9Y5H7 936 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 PCDHA11Q9Y5I1 949 aa13.51□□□□□ -0.25
PRKCB-205ENST00000472066 LAMA2P24043 3122 aaKnown RBP13.5□□□□□ -0.25
PRKCB-205ENST00000472066 ANKRD63C9JTQ0 380 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 HNRNPDLO14979 420 aaKnown RBP13.5□□□□□ -0.25
PRKCB-205ENST00000472066 EIF3DO15371 548 aaKnown RBP eCLIP13.5□□□□□ -0.25
PRKCB-205ENST00000472066 CLDN3O15551 220 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 SMC2O95347 1197 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 MCF2P10911 925 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 FGFR1P11362 822 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 ITGA4P13612 1032 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 MYOGP15173 224 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 MCM4P33991 863 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 PBX2P40425 430 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 RAB30Q15771 203 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 DCAF4L1Q3SXM0 396 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 MPZL3Q6UWV2 235 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 AGMOQ6ZNB7 445 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 APBB1IPQ7Z5R6 666 aaPredicted RBP13.5□□□□□ -0.25
PRKCB-205ENST00000472066 ZBTB33Q86T24 672 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 GPT2Q8TD30 523 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 SCFD1Q8WVM8 642 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 LPPQ93052 612 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 SMARCE1Q969G3 411 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 GSDMAQ96QA5 445 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 YME1L1Q96TA2 773 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 HAPLN2Q9GZV7 340 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 CDT1Q9H211 546 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 IKZF4Q9H2S9 585 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 NXF3Q9H4D5 531 aaKnown RBP13.5□□□□□ -0.25
PRKCB-205ENST00000472066 TMEM206Q9H813 350 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 RNF19AQ9NV58 838 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 MSRAQ9UJ68 235 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 EXOC7Q9UPT5 735 aa13.5□□□□□ -0.25
PRKCB-205ENST00000472066 YBX2Q9Y2T7 364 aaKnown RBP13.5□□□□□ -0.25
PRKCB-205ENST00000472066 HES2Q9Y543 173 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms