RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 RXFP1Q9HBX9 757 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 PALD1Q9ULE6 856 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 ZHX2Q9Y6X8 837 aa8.1□□□□□ -1.11
PTP4A1-202ENST00000470661 HTTP42858 3142 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 MANSC4A6NHS7 340 aaPredicted RBP8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 ARNTLO00327 626 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 NFIBO00712 420 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 NPHS1O60500 1241 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 MAP4K4O95819 1239 aaPredicted RBP8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 TSPAN15O95858 294 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 CAPNS1P04632 268 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 SCG5P05408 212 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 DBHP09172 617 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 RAP1GAPP47736 663 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 IRX6P78412 446 aaPredicted RBP8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 SREBF2Q12772 1141 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 MOGSQ13724 837 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 PLEKHN1Q494U1 663 aaPredicted RBP8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 DENND5AQ6IQ26 1287 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 ATG14Q6ZNE5 492 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 SPATC1Q76KD6 591 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 RPAP2Q8IXW5 612 aaPredicted RBP8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 ZGPATQ8N5A5 531 aaKnown RBP8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 LZTR1Q8N653 840 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 DPF3Q92784 378 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 ARMC5Q96C12 935 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 MMP19Q99542 508 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 MTA3Q9BTC8 594 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 IER2Q9BTL4 223 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 IDI2Q9BXS1 227 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 ARHGEF4Q9NR80 690 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 SAGE1Q9NXZ1 904 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 CPA4Q9UI42 421 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 ZNF112Q9UJU3 913 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 HCFC2Q9Y5Z7 792 aa8.09□□□□□ -1.11
PTP4A1-202ENST00000470661 ATRNL1Q5VV63 1379 aa8.09□□□□□ -1.12
PTP4A1-202ENST00000470661 TEX51A0A1B0GUA7 166 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 TRIM75PA6NK02 468 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 PDPK1O15530 556 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 PRKAB2O43741 272 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 ENTPD3O75355 529 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 LDHCP07864 332 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 IFIT2P09913 472 aaKnown RBP8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 ZBTB48P10074 688 aaPredicted RBP8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 CYP2C8P10632 490 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 CYP2D6P10635 497 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 RRP1P56182 461 aaKnown RBP8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 DLG4P78352 724 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 GSTO1P78417 241 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 RBL2Q08999 1139 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 SERINC3Q13530 473 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 CTU1Q7Z7A3 348 aaKnown RBP8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 ERO1BQ86YB8 467 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 PPIL6Q8IXY8 311 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 SREK1Q8WXA9 508 aaKnown RBP8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 C1orf159Q96HA4 380 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 CCDC140Q96MF4 163 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 OSBPL5Q9H0X9 879 aaPredicted RBP8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 GCM1Q9NP62 436 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 SIRT5Q9NXA8 310 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 SIRPGQ9P1W8 387 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 PFDN2Q9UHV9 154 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 MBD1Q9UIS9 605 aaPredicted RBP8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 RFX7Q2KHR2 1363 aa8.08□□□□□ -1.12
PTP4A1-202ENST00000470661 PDS5AQ29RF7 1337 aaKnown RBP8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 CYP2D7A0A087X1C5 515 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 ZC3H12DA2A288 527 aaKnown RBP8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 HRKO00198 91 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 MEFVO15553 781 aaPredicted RBP8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 SEMA7AO75326 666 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 CPP00450 1065 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 FUCA1P04066 466 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 CYBBP04839 570 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 GLI4P10075 376 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 PDE6AP16499 860 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 CTGFP29279 349 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 GTF2A2P52657 109 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 EPHB3P54753 998 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 PPIL2Q13356 520 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 HSP90AA2PQ14568 343 aaPredicted RBP8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 YOD1Q5VVQ6 348 aaPredicted RBP8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 GADL1Q6ZQY3 521 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 ERC1Q8IUD2 1116 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 CLASRPQ8N2M8 674 aaKnown RBP8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 BHLHE22Q8NFJ8 381 aaPredicted RBP8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 USP33Q8TEY7 942 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 DIO2Q92813 273 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 KIF1BPQ96EK5 621 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 SGSM3Q96HU1 749 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 AARSD1Q9BTE6 412 aaKnown RBP8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 DNAJC18Q9H819 358 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 CNTD2Q9H8S5 307 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 ARMT1Q9H993 441 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 MARCH2Q9P0N8 246 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 TRIM17Q9Y577 477 aa8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 MKI67P46013 3256 aaKnown RBP8.07□□□□□ -1.12
PTP4A1-202ENST00000470661 ZNF532Q9HCE3 1301 aa8.06□□□□□ -1.12
PTP4A1-202ENST00000470661 ZSWIM8A7E2V4 1837 aa8.06□□□□□ -1.12
PTP4A1-202ENST00000470661 TCAF2A6NFQ2 919 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms