RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 KIF22Q14807 665 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 ARL10Q8N8L6 244 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 RFFLQ8WZ73 363 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 KIFAP3Q92845 792 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 STAMBPL1Q96FJ0 436 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 TEKT3Q9BXF9 490 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 OSBPL7Q9BZF2 842 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 IMPG2Q9BZV3 1241 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 EHMT1Q9H9B1 1298 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 ERVK-5Q9HDB9 667 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 AJAP1Q9UKB5 411 aaPredicted RBP11.46□□□□□ -0.57
CHD3-208ENST00000470531 AKAP11Q9UKA4 1901 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 SIPA1L3O60292 1781 aaPredicted RBP11.46□□□□□ -0.57
CHD3-208ENST00000470531 A0A1W2PQJ5 194 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 RBAK-RBAKDNI3L0D1 243 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 NOL4O94818 638 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 KRT10P13645 584 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 GCFC2P16383 781 aaKnown RBP11.46□□□□□ -0.57
CHD3-208ENST00000470531 MARK3P27448 753 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 PDIA5Q14554 519 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 HGSNATQ68CP4 663 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 SPDL1Q96EA4 605 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 RILPQ96NA2 401 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 TGS1Q96RS0 853 aaKnown RBP11.46□□□□□ -0.57
CHD3-208ENST00000470531 TMEM117Q9H0C3 514 aa11.46□□□□□ -0.57
CHD3-208ENST00000470531 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHD3-208ENST00000470531 SEPT9Q9UHD8 586 aaPredicted RBP11.46□□□□□ -0.57
CHD3-208ENST00000470531 TCRBV7S2A1N4TA0A589 114 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 CCDC188H7C350 402 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 MMP10P09238 476 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 ARP10275 920 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 RANBP1P43487 201 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 SCTRP47872 440 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 CPA2P48052 419 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 BASP1P80723 227 aaKnown RBP11.46□□□□□ -0.58
CHD3-208ENST00000470531 ORC1Q13415 861 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 DGKZQ13574 1117 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 CDO1Q16878 200 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 GNPTABQ3T906 1256 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 APBB1IPQ7Z5R6 666 aaPredicted RBP11.46□□□□□ -0.58
CHD3-208ENST00000470531 SLC47A2Q86VL8 602 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 JDP2Q8WYK2 163 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 DNAJC19Q96DA6 116 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 IQCDQ96DY2 449 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 TMBIM4Q9HC24 238 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 PI4KBQ9UBF8 816 aa11.46□□□□□ -0.58
CHD3-208ENST00000470531 C21orf2O43822 256 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 LIG4P49917 911 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 VAMP7P51809 220 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 GPC5P78333 572 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 RNASELQ05823 741 aaKnown RBP11.45□□□□□ -0.58
CHD3-208ENST00000470531 ITGB3BPQ13352 177 aaPredicted RBP11.45□□□□□ -0.58
CHD3-208ENST00000470531 DLGAP5Q15398 846 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 LRRC36Q1X8D7 754 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 ACCSLQ4AC99 568 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 RINT1Q6NUQ1 792 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 TMEM270Q6UE05 265 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 CAVIN3Q969G5 261 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 NT5C1BQ96P26 610 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 ERP44Q9BS26 406 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 CALN1Q9BXU9 219 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 C1orf112Q9NSG2 853 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 ABCF3Q9NUQ8 709 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 MYH7P12883 1935 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 CCDC195A0A1B0GUA6 201 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 A6NNZ2 444 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 SAT1P21673 171 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 FXR2P51116 673 aaKnown RBP eCLIP11.45□□□□□ -0.582e-6■■□□□ 14.1
CHD3-208ENST00000470531 TAF11Q15544 211 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 SMTNL2Q2TAL5 461 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 TUBB8Q3ZCM7 444 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 CBWD2Q8IUF1 395 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 AGBL1Q96MI9 1066 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 AGPAT1Q99943 283 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 TRIM7Q9C029 511 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 MARCOQ9UEW3 520 aaPredicted RBP11.45□□□□□ -0.58
CHD3-208ENST00000470531 FZD1Q9UP38 647 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 TNS2Q63HR2 1409 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 IGF2BP3O00425 579 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHD3-208ENST00000470531 UBOX5O94941 541 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 MUM1Q2TAK8 710 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 LONP2Q86WA8 852 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 ARMC2Q8NEN0 867 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 TTC17Q96AE7 1141 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 IFT74Q96LB3 600 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 NACC1Q96RE7 527 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHD3-208ENST00000470531 TTLL3Q9Y4R7 772 aa11.45□□□□□ -0.58
CHD3-208ENST00000470531 SCN11AQ9UI33 1791 aa11.44□□□□□ -0.58
CHD3-208ENST00000470531 ATP2A1O14983 1001 aa11.44□□□□□ -0.58
CHD3-208ENST00000470531 PYGMP11217 842 aa11.44□□□□□ -0.58
CHD3-208ENST00000470531 PIK3CAP42336 1068 aa11.44□□□□□ -0.58
CHD3-208ENST00000470531 RWDD2BP57060 319 aa11.44□□□□□ -0.58
CHD3-208ENST00000470531 YWHAGP61981 247 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHD3-208ENST00000470531 IGBP1P78318 339 aa11.44□□□□□ -0.58
CHD3-208ENST00000470531 BFSP1Q12934 665 aa11.44□□□□□ -0.58
CHD3-208ENST00000470531 ARHGEF16Q5VV41 709 aa11.44□□□□□ -0.58
CHD3-208ENST00000470531 SPOPLQ6IQ16 392 aa11.44□□□□□ -0.58
CHD3-208ENST00000470531 PALM2Q8IXS6 379 aa11.44□□□□□ -0.58
CHD3-208ENST00000470531 FUKQ8N0W3 1084 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms