RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 SYDE2Q5VT97 1194 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 MBNL2Q5VZF2 373 aaKnown RBP5.35□□□□□ -1.55
BRCA2-202ENST00000470094 FAM180AQ6UWF9 173 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 SH3RF3Q8TEJ3 882 aaPredicted RBP5.35□□□□□ -1.55
BRCA2-202ENST00000470094 ZNF480Q8WV37 535 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 IL17RAQ96F46 866 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 CDC5LQ99459 802 aaKnown RBP5.35□□□□□ -1.55
BRCA2-202ENST00000470094 TRIM8Q9BZR9 551 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 BRINP2Q9C0B6 783 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 ENKD1Q9H0I2 346 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 TRHDEQ9UKU6 1024 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 MYRFQ9Y2G1 1151 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 GIT1Q9Y2X7 761 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 GPR45Q9Y5Y3 372 aa5.35□□□□□ -1.55
BRCA2-202ENST00000470094 TRIM75PA6NK02 468 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 HOXA3O43365 443 aaPredicted RBP5.34□□□□□ -1.55
BRCA2-202ENST00000470094 AKR1B10O60218 316 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 MFAP3LO75121 409 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 KATNA1O75449 491 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 STC2O76061 302 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 MT-CO1P00395 513 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 CFBP00751 764 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 INSRRP14616 1297 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 ACRV1P26436 265 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 IARSP41252 1262 aaKnown RBP5.34□□□□□ -1.55
BRCA2-202ENST00000470094 GZMKP49863 264 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 EVA1CP58658 441 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 CRHR2Q13324 411 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 ZXDCQ2QGD7 858 aaPredicted RBP5.34□□□□□ -1.55
BRCA2-202ENST00000470094 FAM214AQ32MH5 1076 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 GJC2Q5T442 439 aaPredicted RBP5.34□□□□□ -1.55
BRCA2-202ENST00000470094 SPTY2D1Q68D10 685 aaPredicted RBP5.34□□□□□ -1.55
BRCA2-202ENST00000470094 PGM2L1Q6PCE3 622 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 DBX2Q6ZNG2 339 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 GSPT2Q8IYD1 628 aaKnown RBP5.34□□□□□ -1.55
BRCA2-202ENST00000470094 THEMISQ8N1K5 641 aaPredicted RBP5.34□□□□□ -1.55
BRCA2-202ENST00000470094 GPR156Q8NFN8 814 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 RIN2Q8WYP3 895 aaPredicted RBP5.34□□□□□ -1.55
BRCA2-202ENST00000470094 GREM2Q9H772 168 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 MKS1Q9NXB0 559 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 GPRC5DQ9NZD1 345 aa5.34□□□□□ -1.55
BRCA2-202ENST00000470094 HECAQ9UBI9 543 aaPredicted RBP5.34□□□□□ -1.55
BRCA2-202ENST00000470094 SHROOM4Q9ULL8 1493 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 ITGA10O75578 1167 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 GASTP01350 101 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 MYBL2P10244 700 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 ECHS1P30084 290 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 MALLQ13021 153 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 MRPL49Q13405 166 aaKnown RBP5.33□□□□□ -1.56
BRCA2-202ENST00000470094 ABCB5Q2M3G0 1257 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 MST1LQ2TV78 715 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 INAVAQ3KP66 663 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 PDZD4Q76G19 769 aaPredicted RBP5.33□□□□□ -1.56
BRCA2-202ENST00000470094 APBB1IPQ7Z5R6 666 aaPredicted RBP5.33□□□□□ -1.56
BRCA2-202ENST00000470094 ELOA2Q8IYF1 753 aaPredicted RBP5.33□□□□□ -1.56
BRCA2-202ENST00000470094 CBARPQ8N350 705 aaPredicted RBP5.33□□□□□ -1.56
BRCA2-202ENST00000470094 MB21D1Q8N884 522 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 SSH1Q8WYL5 1049 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 ST8SIA2Q92186 375 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 ADI1Q9BV57 179 aa5.33□□□□□ -1.56
BRCA2-202ENST00000470094 CCDC8Q9H0W5 538 aaPredicted RBP5.33□□□□□ -1.56
BRCA2-202ENST00000470094 RBM12Q9NTZ6 932 aaKnown RBP5.33□□□□□ -1.56
BRCA2-202ENST00000470094 AURKAIP1Q9NWT8 199 aaPredicted RBP5.33□□□□□ -1.56
BRCA2-202ENST00000470094 NOP58Q9Y2X3 529 aaKnown RBP5.33□□□□□ -1.56
BRCA2-202ENST00000470094 AGXTP21549 392 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 ADSLP30566 484 aaPredicted RBP5.32□□□□□ -1.56
BRCA2-202ENST00000470094 CRHR1P34998 444 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 MAN2A2P49641 1150 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 APBA1Q02410 837 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 CNGB1Q14028 1251 aaPredicted RBP5.32□□□□□ -1.56
BRCA2-202ENST00000470094 PUM1Q14671 1186 aaKnown RBP eCLIP5.32□□□□□ -1.56
BRCA2-202ENST00000470094 NRN1LQ496H8 165 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 USP39Q53GS9 565 aaKnown RBP5.32□□□□□ -1.56
BRCA2-202ENST00000470094 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 SPRED1Q7Z699 444 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 C1orf162Q8NEQ5 155 aaPredicted RBP5.32□□□□□ -1.56
BRCA2-202ENST00000470094 MDGA1Q8NFP4 955 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 ATXN2LQ8WWM7 1075 aaKnown RBP5.32□□□□□ -1.56
BRCA2-202ENST00000470094 GPATCH3Q96I76 525 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 CPPED1Q9BRF8 314 aaPredicted RBP5.32□□□□□ -1.56
BRCA2-202ENST00000470094 GPR87Q9BY21 358 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 DMRT3Q9NQL9 472 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 ZNF277Q9NRM2 450 aaPredicted RBP5.32□□□□□ -1.56
BRCA2-202ENST00000470094 HOMER2Q9NSB8 354 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 SCOCQ9UIL1 159 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 HDAC5Q9UQL6 1122 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 PCDHGA2Q9Y5H1 932 aa5.32□□□□□ -1.56
BRCA2-202ENST00000470094 hCG_2014768A0A024R1R8 64 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 SHTN1A0MZ66 631 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 NCLP19338 710 aaKnown RBP5.31□□□□□ -1.56
BRCA2-202ENST00000470094 PER3P56645 1201 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 RRP1BQ14684 758 aaKnown RBP5.31□□□□□ -1.56
BRCA2-202ENST00000470094 ACAP2Q15057 778 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 RNF207Q6ZRF8 634 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 Q6ZRM9 215 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 FAM83AQ86UY5 434 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 C1orf210Q8IVY1 113 aa5.31□□□□□ -1.56
BRCA2-202ENST00000470094 LILRA3Q8N6C8 439 aaPredicted RBP5.31□□□□□ -1.56
BRCA2-202ENST00000470094 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms