RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 RSPH10BP0C881 870 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 FMO5P49326 533 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 MXI1P50539 228 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 PEX3P56589 373 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 NCBP1Q09161 790 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 WDR44Q5JSH3 913 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 KLHDC7AQ5VTJ3 777 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SWSAP1Q6NVH7 229 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 APBB1IPQ7Z5R6 666 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SHCBP1Q8NEM2 672 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 BCAS4Q8TDM0 211 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 CDCA5Q96FF9 252 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 TRIM4Q9C037 500 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SPATC1LQ9H0A9 340 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 MFAP3P55082 362 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 EIF3BP55884 814 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 MRPS9P82933 396 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 BBOF1Q8ND07 529 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SLC35C1Q96A29 364 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 L3MBTL3Q96JM7 780 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 WDR24Q96S15 920 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SIPA1L1O43166 1804 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SPATA31C2B4DYI2 1134 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 UCHL3P15374 230 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 TNFAIP3P21580 790 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 ARID5AQ03989 594 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 TADA2BQ86TJ2 420 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 CEP120Q8N960 986 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 CCDC160A6NGH7 325 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 DHX15O43143 795 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 ACTR2P61160 394 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 DYNC1I2Q13409 638 aaKnown RBP7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 SLC18A3Q16572 532 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 AFAP1L2Q8N4X5 818 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 WHAMMQ8TF30 809 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 CHP1Q99653 195 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 AIPL1Q9NZN9 384 aa7.53□□□□□ -1.2
GAPVD1-215ENST00000470056 MYO1CO00159 1063 aa7.52□□□□□ -1.2
GAPVD1-215ENST00000470056 STMN1P16949 149 aa7.52□□□□□ -1.2
GAPVD1-215ENST00000470056 GTF2BQ00403 316 aa7.52□□□□□ -1.2
GAPVD1-215ENST00000470056 PRKCEQ02156 737 aa7.52□□□□□ -1.2
GAPVD1-215ENST00000470056 FAM133AQ8N9E0 248 aa7.52□□□□□ -1.2
GAPVD1-215ENST00000470056 GLG1Q92896 1179 aa7.52□□□□□ -1.2
GAPVD1-215ENST00000470056 ZFP91Q96JP5 570 aaPredicted RBP7.52□□□□□ -1.2
GAPVD1-215ENST00000470056 MMP19Q99542 508 aa7.52□□□□□ -1.2
GAPVD1-215ENST00000470056 STK33Q9BYT3 514 aa7.52□□□□□ -1.2
GAPVD1-215ENST00000470056 AKAP3O75969 853 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 H2AFZP0C0S5 128 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 CETPP11597 493 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 HSPA6P17066 643 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 GTF2H1P32780 548 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 FKBP1BP68106 108 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 GLE1Q53GS7 698 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 DENND2CQ68D51 928 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 H2AFVQ71UI9 128 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 IFT81Q8WYA0 676 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 HSPBP1Q9NZL4 362 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 ATP8B3O60423 1300 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 REPS2Q8NFH8 660 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 UBLCP1Q8WVY7 318 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 INTS2Q9H0H0 1204 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 BATF3Q9NR55 127 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 A0A0G2JLL6 359 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 OATP04181 439 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 VAMP7P51809 220 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 ENOSF1Q7L5Y1 443 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 PRRT2Q7Z6L0 340 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 GDAP1L1Q96MZ0 367 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 CYP26B1Q9NR63 512 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 INTUQ9ULD6 942 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 I3L4J1 428 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 PPFIA2O75334 1257 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 EFNA5P52803 228 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 AP3M2P53677 418 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 TTLL4Q14679 1199 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 SURF1Q15526 300 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 BRDTQ58F21 947 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 SEPT1Q8WYJ6 367 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 POMGNT1Q8WZA1 660 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 POLR3FQ9H1D9 316 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 DENND3A2RUS2 1198 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 SLC16A4O15374 487 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 VIMP08670 466 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 SLC26A2P50443 739 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 ALDH5A1P51649 535 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 HERVK_113P62684 666 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 EMC2Q15006 297 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 MAP7D1Q3KQU3 841 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 SMC1BQ8NDV3 1235 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 TXLNGQ9NUQ3 528 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 TBX20Q9UMR3 447 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 TADA3O75528 432 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 GARTP22102 1010 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 NCKAP1LP55160 1127 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 LONRF2Q1L5Z9 754 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 ZC2HC1CQ53FD0 456 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 KRT39Q6A163 491 aa7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 TRMT1LQ7Z2T5 733 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-215ENST00000470056 MAP4K3Q8IVH8 894 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms