RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 SPTLC2O15270 562 aa12.89□□□□□ -0.35
FAM228B-203ENST00000469867 P4HBP07237 508 aaKnown RBP12.89□□□□□ -0.35
FAM228B-203ENST00000469867 GCFC2P16383 781 aaKnown RBP12.89□□□□□ -0.35
FAM228B-203ENST00000469867 SFPQP23246 707 aaKnown RBP eCLIP12.89□□□□□ -0.35
FAM228B-203ENST00000469867 NCAPH2Q6IBW4 605 aa12.89□□□□□ -0.35
FAM228B-203ENST00000469867 TMC7Q7Z402 723 aa12.89□□□□□ -0.35
FAM228B-203ENST00000469867 ZNF598Q86UK7 904 aaKnown RBP12.89□□□□□ -0.35
FAM228B-203ENST00000469867 LUZP1Q86V48 1076 aa12.89□□□□□ -0.35
FAM228B-203ENST00000469867 FSIP1Q8NA03 581 aa12.89□□□□□ -0.35
FAM228B-203ENST00000469867 SYAP1Q96A49 352 aaPredicted RBP12.89□□□□□ -0.35
FAM228B-203ENST00000469867 ZNF558Q96NG5 402 aa12.89□□□□□ -0.35
FAM228B-203ENST00000469867 IFT122Q9HBG6 1241 aa12.89□□□□□ -0.35
FAM228B-203ENST00000469867 PUF60Q9UHX1 559 aaKnown RBP12.89□□□□□ -0.35
FAM228B-203ENST00000469867 MUTYHQ9UIF7 546 aa12.89□□□□□ -0.35
FAM228B-203ENST00000469867 HCN4Q9Y3Q4 1203 aa12.89□□□□□ -0.35
FAM228B-203ENST00000469867 C19orf67A6NJJ6 358 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 CTIFO43310 598 aaKnown RBP12.88□□□□□ -0.35
FAM228B-203ENST00000469867 EYA4O95677 639 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 EOMESO95936 686 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 SLFN14P0C7P3 912 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 SRGAP2CP0DJJ0 459 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 PHKA2P46019 1235 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 NDUFA8P51970 172 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 POLGP54098 1239 aaPredicted RBP12.88□□□□□ -0.35
FAM228B-203ENST00000469867 CTTNQ14247 550 aaKnown RBP12.88□□□□□ -0.35
FAM228B-203ENST00000469867 AXDND1Q5T1B0 1012 aaPredicted RBP12.88□□□□□ -0.35
FAM228B-203ENST00000469867 CATSPER4Q7RTX7 472 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 PRPF31Q8WWY3 499 aaKnown RBP12.88□□□□□ -0.35
FAM228B-203ENST00000469867 MRPS27Q92552 414 aaKnown RBP12.88□□□□□ -0.35
FAM228B-203ENST00000469867 WASF1Q92558 559 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 FUCA2Q9BTY2 467 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 APOL5Q9BWW9 433 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 CFAP54Q96N23 3096 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 CACNA1HO95180 2353 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 ZC3H11AO75152 810 aaKnown RBP eCLIP12.88□□□□□ -0.35
FAM228B-203ENST00000469867 YWHABP31946 246 aaKnown RBP12.88□□□□□ -0.35
FAM228B-203ENST00000469867 ALDH7A1P49419 539 aaKnown RBP12.88□□□□□ -0.35
FAM228B-203ENST00000469867 CDC42EP1Q00587 391 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 KRT17Q04695 432 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 SPIRE1Q08AE8 756 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 LLGL2Q6P1M3 1020 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 ZNF410Q86VK4 478 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 TMEM173Q86WV6 379 aaPredicted RBP12.88□□□□□ -0.35
FAM228B-203ENST00000469867 ZNF592Q92610 1267 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 POP1Q99575 1024 aaKnown RBP12.88□□□□□ -0.35
FAM228B-203ENST00000469867 NUP62CLQ9H1M0 184 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 MINDY3Q9H8M7 445 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 INPP5FQ9Y2H2 1132 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 USP15Q9Y4E8 981 aaPredicted RBP12.88□□□□□ -0.35
FAM228B-203ENST00000469867 COL4A3BPQ9Y5P4 624 aa12.88□□□□□ -0.35
FAM228B-203ENST00000469867 DMDP11532 3685 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 CA8P35219 290 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 PPM1AP35813 382 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 KRT2P35908 639 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 PLCB3Q01970 1234 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 COASYQ13057 564 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 SLC39A14Q15043 492 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 CCDC186Q7Z3E2 898 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 TPH2Q8IWU9 490 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 ENGASEQ8NFI3 743 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 DYDC2Q96IM9 177 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 FAM105AQ9NUU6 356 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 SPG21Q9NZD8 308 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 TBX3O15119 743 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 SP100P23497 879 aaPredicted RBP12.87□□□□□ -0.35
FAM228B-203ENST00000469867 ARID5BQ14865 1188 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 DUSP6Q16828 381 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 RNF135Q8IUD6 432 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 JPH2Q9BR39 696 aaPredicted RBP12.87□□□□□ -0.35
FAM228B-203ENST00000469867 INO80BQ9C086 356 aaPredicted RBP12.87□□□□□ -0.35
FAM228B-203ENST00000469867 GBP3Q9H0R5 595 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 DHX33Q9H6R0 707 aaKnown RBP12.87□□□□□ -0.35
FAM228B-203ENST00000469867 BRMS1Q9HCU9 246 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 CHST12Q9NRB3 414 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 LZTS1Q9Y250 596 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 ZNF318Q5VUA4 2279 aa12.87□□□□□ -0.35
FAM228B-203ENST00000469867 PRR33A8MZF0 331 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 YEATS4O95619 227 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 BCAR1P56945 870 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 SAFBQ15424 915 aaKnown RBP eCLIP12.86□□□□□ -0.35
FAM228B-203ENST00000469867 UVSSAQ2YD98 709 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 XKR9Q5GH70 373 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 C4orf19Q8IY42 314 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 PSPC1Q8WXF1 523 aaKnown RBP12.86□□□□□ -0.35
FAM228B-203ENST00000469867 TNFRSF25Q93038 417 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 FAM122AQ96E09 287 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 RPGRIP1Q96KN7 1286 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 TNMDQ9H2S6 317 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 FOXP1Q9H334 677 aaPredicted RBP12.86□□□□□ -0.35
FAM228B-203ENST00000469867 CDH22Q9UJ99 828 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 PCDHA12Q9UN75 941 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 FSCN2O14926 492 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 PLA2G5P39877 138 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 AFF1P51825 1210 aaKnown RBP12.86□□□□□ -0.35
FAM228B-203ENST00000469867 LAMTOR4Q0VGL1 99 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 EPHA7Q15375 998 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 ADALQ6DHV7 355 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 SHC4Q6S5L8 630 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 GLB1LQ6UWU2 654 aa12.86□□□□□ -0.35
FAM228B-203ENST00000469867 SLFN12Q8IYM2 578 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms