RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 STARD6P59095 220 aa20.43■□□□□ 0.86
TTC28-205ENST00000469670 FGD1P98174 961 aa20.43■□□□□ 0.86
TTC28-205ENST00000469670 AKAP17AQ02040 695 aaKnown RBP20.43■□□□□ 0.86
TTC28-205ENST00000469670 TSGA10IPQ3SY00 556 aa20.43■□□□□ 0.86
TTC28-205ENST00000469670 Q4G0T1 1027 aa20.43■□□□□ 0.86
TTC28-205ENST00000469670 SRGAP1Q7Z6B7 1085 aa20.43■□□□□ 0.86
TTC28-205ENST00000469670 MAML2Q8IZL2 1156 aaPredicted RBP20.43■□□□□ 0.86
TTC28-205ENST00000469670 PHKBQ93100 1093 aa20.43■□□□□ 0.86
TTC28-205ENST00000469670 CNTNAP3BQ96NU0 1288 aa20.43■□□□□ 0.86
TTC28-205ENST00000469670 CNTNAP3Q9BZ76 1288 aa20.43■□□□□ 0.86
TTC28-205ENST00000469670 MINDY3Q9H8M7 445 aa20.43■□□□□ 0.86
TTC28-205ENST00000469670 UBN1Q9NPG3 1134 aa20.43■□□□□ 0.86
TTC28-205ENST00000469670 TGM5O43548 720 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 LRRN2O75325 713 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 C1RP00736 705 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 SRGAP2CP0DJJ0 459 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 ITGA4P13612 1032 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 PSMC5P62195 406 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 SMG8Q8ND04 991 aaKnown RBP20.42■□□□□ 0.86
TTC28-205ENST00000469670 CNNM3Q8NE01 707 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 TBCKQ8TEA7 893 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 SHDQ96IW2 340 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 PRKD2Q9BZL6 878 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 CHST7Q9NS84 486 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 VPS54Q9P1Q0 977 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 WDR81Q562E7 1941 aa20.42■□□□□ 0.86
TTC28-205ENST00000469670 F8W810 466 aa20.41■□□□□ 0.86
TTC28-205ENST00000469670 KRT37O76014 449 aa20.41■□□□□ 0.86
TTC28-205ENST00000469670 DSC1Q08554 894 aa20.41■□□□□ 0.86
TTC28-205ENST00000469670 KRT32Q14532 448 aa20.41■□□□□ 0.86
TTC28-205ENST00000469670 PRPF31Q8WWY3 499 aaKnown RBP20.41■□□□□ 0.86
TTC28-205ENST00000469670 SLC7A3Q8WY07 619 aa20.41■□□□□ 0.86
TTC28-205ENST00000469670 GAD1Q99259 594 aa20.41■□□□□ 0.86
TTC28-205ENST00000469670 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.41■□□□□ 0.86
TTC28-205ENST00000469670 ARL5CA6NH57 179 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 NR1I2O75469 434 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 TDP2O95551 362 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 HMGB1P09429 215 aaKnown RBP20.4■□□□□ 0.86
TTC28-205ENST00000469670 MLH1P40692 756 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 NPEPPSP55786 919 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 GPC5P78333 572 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 VARS2Q5ST30 1063 aaKnown RBP20.4■□□□□ 0.86
TTC28-205ENST00000469670 LILRA6Q6PI73 481 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 GLYCTKQ8IVS8 523 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 PSPC1Q8WXF1 523 aaKnown RBP20.4■□□□□ 0.86
TTC28-205ENST00000469670 TMEM143Q96AN5 459 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 B3GALT6Q96L58 329 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 RPP25Q9BUL9 199 aaKnown RBP20.4■□□□□ 0.86
TTC28-205ENST00000469670 RNF39Q9H2S5 420 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 NCDNQ9UBB6 729 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 IPPQ9Y573 584 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 ZFP37Q9Y6Q3 630 aaPredicted RBP20.4■□□□□ 0.86
TTC28-205ENST00000469670 EPG5Q9HCE0 2579 aa20.4■□□□□ 0.86
TTC28-205ENST00000469670 CACNA1BQ00975 2339 aa20.39■□□□□ 0.86
TTC28-205ENST00000469670 NID2Q14112 1375 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 CYP3A7-CYP3A51PA0A087WV96 503 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 FSHRP23945 695 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 CYP3A7P24462 503 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 SCNN1GP51170 649 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 LAMTOR4Q0VGL1 99 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 SNW1Q13573 536 aaKnown RBP20.39■□□□□ 0.85
TTC28-205ENST00000469670 ZNF528Q3MIS6 628 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 Q6ZUG5 572 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 ZNF579Q8NAF0 562 aaKnown RBP20.39■□□□□ 0.85
TTC28-205ENST00000469670 ETNPPLQ8TBG4 499 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 FGF14Q92915 247 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 BORCS6Q96GS4 357 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 COLEC11Q9BWP8 271 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 SLC26A6Q9BXS9 759 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 EIF2AQ9BY44 585 aaKnown RBP20.39■□□□□ 0.85
TTC28-205ENST00000469670 RNF26Q9BY78 433 aaPredicted RBP20.39■□□□□ 0.85
TTC28-205ENST00000469670 BCO2Q9BYV7 579 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 SPATA6Q9NWH7 488 aaPredicted RBP20.39■□□□□ 0.85
TTC28-205ENST00000469670 MIOSQ9NXC5 875 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 FNIP2Q9P278 1114 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 FBXO4Q9UKT5 387 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 GPR179Q6PRD1 2367 aa20.39■□□□□ 0.85
TTC28-205ENST00000469670 KANSL1LA0AUZ9 987 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 SPTLC1O15269 473 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 LAMTOR5O43504 91 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 ZMYND10O75800 440 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 CPA1P15085 419 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 SDHBP21912 280 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 NLRP5P59047 1200 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 NTRK3Q16288 839 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 USP41Q3LFD5 358 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 FUT10Q6P4F1 479 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 PARM1Q6UWI2 310 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 EXOC8Q8IYI6 725 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 GPR65Q8IYL9 337 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 BRF1Q92994 677 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 CEP170P1Q96L14 293 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 ZFP42Q96MM3 310 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 C22orf23Q9BZE7 217 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 GPR62Q9BZJ7 368 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 DHX33Q9H6R0 707 aaKnown RBP20.38■□□□□ 0.85
TTC28-205ENST00000469670 HES2Q9Y543 173 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 DOCK8Q8NF50 2099 aa20.38■□□□□ 0.85
TTC28-205ENST00000469670 ERLIN2O94905 339 aa20.37■□□□□ 0.85
TTC28-205ENST00000469670 RPL17P18621 184 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms