RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 KLC2Q9H0B6 622 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 SENP2Q9HC62 589 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 WDR35Q9P2L0 1181 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 UBE2Q2LH0YL09 131 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 P4HA2O15460 535 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 TRIM49P0CI25 452 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 TRIM49CP0CI26 452 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 CENPUQ71F23 418 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 TAB3Q8N5C8 712 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-213ENST00000469300 PDLIM2Q96JY6 352 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 CAPN11Q9UMQ6 739 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 TTC26A0AVF1 554 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 IL9RQ01113 521 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 CDO1Q16878 200 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 GPC2Q8N158 579 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 MGARPQ8TDB4 240 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 ZKSCAN4Q969J2 545 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-213ENST00000469300 PPP2R3CQ969Q6 453 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 KIAA1683Q9H0B3 1180 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 CYP26B1Q9NR63 512 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 MYMKA6NI61 221 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 POC1B-GALNT4F8VUJ3 575 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 CTDNEP1O95476 244 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 CYP11B2P19099 503 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 RECQLP46063 649 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-213ENST00000469300 SGSM1Q2NKQ1 1148 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 TMEM143Q96AN5 459 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 TAAR1Q96RJ0 339 aa16.07■□□□□ 0.16
LIMS2-213ENST00000469300 ALDH1A1P00352 501 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 CYP2C9P11712 490 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 SREBF1P36956 1147 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 SEC23AQ15436 765 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 CCDC144BQ3MJ40 725 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 PLEKHH3Q7Z736 793 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 FBXL16Q8N461 479 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 DDX23Q9BUQ8 820 aaKnown RBP16.06■□□□□ 0.16
LIMS2-213ENST00000469300 DDX56Q9NY93 547 aaKnown RBP16.06■□□□□ 0.16
LIMS2-213ENST00000469300 TLK1Q9UKI8 766 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 PDXDC1Q6P996 788 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 RNF180Q86T96 592 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 ZNF564Q8TBZ8 553 aaPredicted RBP16.06■□□□□ 0.16
LIMS2-213ENST00000469300 LRRC8CQ8TDW0 803 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 GLT1D1Q96MS3 346 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 ZWILCHQ9H900 591 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 FBXO28Q9NVF7 368 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 FGGP02679 453 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 CAV1Q03135 178 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 PPP6R3Q5H9R7 873 aaPredicted RBP16.06■□□□□ 0.16
LIMS2-213ENST00000469300 PCGF5Q86SE9 256 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 DHX38Q92620 1227 aaKnown RBP16.06■□□□□ 0.16
LIMS2-213ENST00000469300 FMO2Q99518 471 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 SALL3Q9BXA9 1300 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 A0A087WUV0 522 aaPredicted RBP16.06■□□□□ 0.16
LIMS2-213ENST00000469300 FOXN1O15353 648 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 CXCR5P32302 372 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 SLC26A2P50443 739 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 DDR1Q08345 913 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 SF3A3Q12874 501 aaKnown RBP eCLIP16.06■□□□□ 0.16
LIMS2-213ENST00000469300 MAP3K21Q5TCX8 1036 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 RFFLQ8WZ73 363 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 EHD2Q9NZN4 543 aa16.06■□□□□ 0.16
LIMS2-213ENST00000469300 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.06■□□□□ 0.16
LIMS2-213ENST00000469300 FTLP02792 175 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 RFC1P35251 1148 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 KCNJ6P48051 423 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 RWDD4Q6NW29 188 aaKnown RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 EMBQ6PCB8 327 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 FBXO41Q8TF61 875 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 TRIM56Q9BRZ2 755 aaKnown RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 STK33Q9BYT3 514 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 RIOX1Q9H6W3 641 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 PALMO75781 387 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 DHX9Q08211 1270 aaKnown RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 TMEM132DQ14C87 1099 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 GNASQ5JWF2 1037 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 DACT2Q5SW24 774 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 WNT8AQ9H1J5 351 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 TMEM60Q9H2L4 133 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 RPS6KA5O75582 802 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 SEC31AO94979 1220 aaKnown RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 ZFXP17010 805 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 RNF219Q5W0B1 726 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 RAPH1Q70E73 1250 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 PHLDB2Q86SQ0 1253 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 TADA2BQ86TJ2 420 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 RHOT1Q8IXI2 618 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 UHMK1Q8TAS1 419 aaKnown RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 HSPH1Q92598 858 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 GBP5Q96PP8 586 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 HPCAL4Q9UM19 191 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 DDTLA6NHG4 134 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 LUC7L3O95232 432 aaKnown RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 APOEP02649 317 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 SKIP12755 728 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 WDR72Q3MJ13 1102 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 CYP4F22Q6NT55 531 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 CNPY4Q8N129 248 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 SYT2Q8N9I0 419 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 BCAS4Q8TDM0 211 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms