RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 EIF4BP23588 611 aaKnown RBP12.03□□□□□ -0.48
TRAIP-202ENST00000469027 PHKA2P46019 1235 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 CLCN3P51790 818 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 ACTR2P61160 394 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 CREB5Q02930 508 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 LRRC32Q14392 662 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 CCDC178Q5BJE1 867 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 LIN9Q5TKA1 542 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 TWF2Q6IBS0 349 aaKnown RBP12.03□□□□□ -0.48
TRAIP-202ENST00000469027 ZNF589Q86UQ0 364 aaPredicted RBP12.03□□□□□ -0.48
TRAIP-202ENST00000469027 NPAS3Q8IXF0 933 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 CKAP2LQ8IYA6 745 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 FAM227BQ96M60 508 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 PLA2G2FQ9BZM2 168 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 SLC32A1Q9H598 525 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 HELLSQ9NRZ9 838 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 RBM12Q9NTZ6 932 aaKnown RBP12.03□□□□□ -0.48
TRAIP-202ENST00000469027 NEDD4P46934 1319 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 COL1A2P08123 1366 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 APC2O95996 2303 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 CACNA1EQ15878 2313 aa12.03□□□□□ -0.48
TRAIP-202ENST00000469027 MEIS3P2A8K0S8 358 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 NRP1O14786 923 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 CCL16O15467 120 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 XYLBO75191 536 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 CHRNB1P11230 501 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 ITGB5P18084 799 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 HOXC13P31276 330 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 PXNP49023 591 aaPredicted RBP12.02□□□□□ -0.49
TRAIP-202ENST00000469027 SLC26A2P50443 739 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 SIM1P81133 766 aaPredicted RBP12.02□□□□□ -0.49
TRAIP-202ENST00000469027 ZNF484Q5JVG2 852 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 PPM1LQ5SGD2 360 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 USP17L6PQ6QN14 398 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 PIK3R5Q8WYR1 880 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 SLC39A7Q92504 469 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 MTMR8Q96EF0 704 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 MCRS1Q96EZ8 462 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 SDF4Q9BRK5 362 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 RNF41Q9H4P4 317 aaPredicted RBP12.02□□□□□ -0.49
TRAIP-202ENST00000469027 CCDC86Q9H6F5 360 aaKnown RBP12.02□□□□□ -0.49
TRAIP-202ENST00000469027 RXFP1Q9HBX9 757 aa12.02□□□□□ -0.49
TRAIP-202ENST00000469027 SPAARA0A1B0GVQ0 90 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 LNP1A1A4G5 178 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 J3QKU1 62 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 OFD1O75665 1012 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 C1QL1O75973 258 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 DDHD2O94830 711 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 PAPSS2O95340 614 aaPredicted RBP12.01□□□□□ -0.49
TRAIP-202ENST00000469027 PAPLNO95428 1278 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 C22orf31O95567 290 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 CAVIN2O95810 425 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 SKIP12755 728 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 RPL17P18621 184 aaKnown RBP12.01□□□□□ -0.49
TRAIP-202ENST00000469027 CCNE1P24864 410 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 OR1G1P47890 313 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 PTGDRQ13258 359 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 FAM160B1Q5W0V3 765 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 Q6ZS52 159 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 CHCHD4Q8N4Q1 142 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 PIBF1Q8WXW3 757 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 EVI5LQ96CN4 794 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 UBL7Q96S82 380 aaPredicted RBP12.01□□□□□ -0.49
TRAIP-202ENST00000469027 TMEM175Q9BSA9 504 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 RAXQ9Y2V3 346 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 PCDHB15Q9Y5E8 787 aa12.01□□□□□ -0.49
TRAIP-202ENST00000469027 KALRNO60229 2985 aa12□□□□□ -0.49
TRAIP-202ENST00000469027 SHROOM3Q8TF72 1996 aa12□□□□□ -0.49
TRAIP-202ENST00000469027 MAP3K13O43283 966 aa12□□□□□ -0.49
TRAIP-202ENST00000469027 CSDE1O75534 798 aaKnown RBP12□□□□□ -0.49
TRAIP-202ENST00000469027 PCP11498 1178 aaKnown RBP12□□□□□ -0.49
TRAIP-202ENST00000469027 DSG1Q02413 1049 aa12□□□□□ -0.49
TRAIP-202ENST00000469027 MCMDC2Q4G0Z9 681 aa12□□□□□ -0.49
TRAIP-202ENST00000469027 PABPC1LQ4VXU2 614 aaKnown RBP12□□□□□ -0.49
TRAIP-202ENST00000469027 TANGO2Q6ICL3 276 aa12□□□□□ -0.49
TRAIP-202ENST00000469027 PDXDC2PQ6P474 469 aa12□□□□□ -0.49
TRAIP-202ENST00000469027 NLRP7Q8WX94 980 aa12□□□□□ -0.49
TRAIP-202ENST00000469027 IRF7Q92985 503 aa12□□□□□ -0.49
TRAIP-202ENST00000469027 B3GALT6Q96L58 329 aa12□□□□□ -0.49
TRAIP-202ENST00000469027 ZSCAN10Q96SZ4 725 aaPredicted RBP12□□□□□ -0.49
TRAIP-202ENST00000469027 TRMT61BQ9BVS5 477 aaKnown RBP12□□□□□ -0.49
TRAIP-202ENST00000469027 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12□□□□□ -0.49
TRAIP-202ENST00000469027 C2orf42Q9NWW7 574 aa12□□□□□ -0.49
TRAIP-202ENST00000469027 MRPS23Q9Y3D9 190 aaKnown RBP12□□□□□ -0.49
TRAIP-202ENST00000469027 ASCC3Q8N3C0 2202 aaKnown RBP11.99□□□□□ -0.49
TRAIP-202ENST00000469027 PNMA6FA0A0J9YX94 578 aa11.99□□□□□ -0.49
TRAIP-202ENST00000469027 H0Y626 953 aa11.99□□□□□ -0.49
TRAIP-202ENST00000469027 TRIM16O95361 564 aa11.99□□□□□ -0.49
TRAIP-202ENST00000469027 POMCP01189 267 aa11.99□□□□□ -0.49
TRAIP-202ENST00000469027 CAPNS1P04632 268 aa11.99□□□□□ -0.49
TRAIP-202ENST00000469027 C8AP07357 584 aa11.99□□□□□ -0.49
TRAIP-202ENST00000469027 HNRNPA1P09651 372 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRAIP-202ENST00000469027 DARSP14868 501 aaKnown RBP11.99□□□□□ -0.49
TRAIP-202ENST00000469027 TMOD1P28289 359 aa11.99□□□□□ -0.49
TRAIP-202ENST00000469027 ELF2Q15723 593 aa11.99□□□□□ -0.49
TRAIP-202ENST00000469027 LRRC71Q8N4P6 559 aa11.99□□□□□ -0.49
TRAIP-202ENST00000469027 ENAHQ8N8S7 591 aaPredicted RBP11.99□□□□□ -0.49
TRAIP-202ENST00000469027 HCFC1R1Q9NWW0 138 aa11.99□□□□□ -0.49
TRAIP-202ENST00000469027 PIN4Q9Y237 131 aaKnown RBP11.99□□□□□ -0.49
TRAIP-202ENST00000469027 URB1O60287 2271 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms