RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 STRIP2Q9ULQ0 834 aa5.69□□□□□ -1.5
TRIM27-204ENST00000467742 CYP46A1Q9Y6A2 500 aa5.69□□□□□ -1.5
TRIM27-204ENST00000467742 CYP26A1O43174 497 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 DHX16O60231 1041 aaKnown RBP5.68□□□□□ -1.5
TRIM27-204ENST00000467742 ADCY3O60266 1144 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 SLC25A27O95847 323 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 HMGB1P09429 215 aaKnown RBP5.68□□□□□ -1.5
TRIM27-204ENST00000467742 HOXC6P09630 235 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 CYBAP13498 195 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 PLCG1P19174 1290 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 PDIA3P30101 505 aaKnown RBP5.68□□□□□ -1.5
TRIM27-204ENST00000467742 CYP2C19P33261 490 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 NTF4P34130 210 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 SOX9P48436 509 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 METAP2P50579 478 aaKnown RBP eCLIP5.68□□□□□ -1.5
TRIM27-204ENST00000467742 SOX10P56693 466 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 EVCP57679 992 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 CCT2P78371 535 aaKnown RBP5.68□□□□□ -1.5
TRIM27-204ENST00000467742 CCNA1P78396 465 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 ARID5AQ03989 594 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 STK3Q13188 491 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 ZNF792Q3KQV3 632 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 SLC9C1Q4G0N8 1177 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 NAALADL2Q58DX5 795 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 TMEM63BQ5T3F8 832 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 MAP3K21Q5TCX8 1036 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 SLC6A19Q695T7 634 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 WWC2Q6AWC2 1192 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 MCTP1Q6DN14 999 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 VSIG10LQ86VR7 867 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 MRPL41Q8IXM3 137 aaKnown RBP5.68□□□□□ -1.5
TRIM27-204ENST00000467742 FAM133AQ8N9E0 248 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 FANCBQ8NB91 859 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 IL31RAQ8NI17 732 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 CTCFLQ8NI51 663 aaPredicted RBP5.68□□□□□ -1.5
TRIM27-204ENST00000467742 RAET1EQ8TD07 263 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 PHKBQ93100 1093 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 COA7Q96BR5 231 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 MMP19Q99542 508 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 MAP3K14Q99558 947 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 C22orf23Q9BZE7 217 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 KATNBL1Q9H079 304 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 MROH8Q9H579 483 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 ACAD9Q9H845 621 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 VAT1LQ9HCJ6 419 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 CYP39A1Q9NYL5 469 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 TPCN1Q9ULQ1 816 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 POLR3KQ9Y2Y1 108 aaPredicted RBP5.68□□□□□ -1.5
TRIM27-204ENST00000467742 SLC12A7Q9Y666 1083 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 KIAA0100Q14667 2235 aaKnown RBP5.68□□□□□ -1.5
TRIM27-204ENST00000467742 PTPRSQ13332 1948 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 LOXHD1Q8IVV2 1947 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 REV3LO60673 3130 aa5.68□□□□□ -1.5
TRIM27-204ENST00000467742 SCN10AQ9Y5Y9 1956 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 GBF1Q92538 1859 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 FAM170BA6NMN3 283 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 STXBP3O00186 592 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 ZBTB5O15062 677 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 LRIG2O94898 1065 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 HTR3BO95264 441 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 CTDNEP1O95476 244 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 HMGCRP04035 888 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 FCER1AP12319 257 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 ATF4P18848 351 aaPredicted RBP5.67□□□□□ -1.5
TRIM27-204ENST00000467742 CCND3P30281 292 aaPredicted RBP5.67□□□□□ -1.5
TRIM27-204ENST00000467742 RGS2P41220 211 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 YARSP54577 528 aaKnown RBP5.67□□□□□ -1.5
TRIM27-204ENST00000467742 GHRHRQ02643 423 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 CACNB2Q08289 660 aaPredicted RBP5.67□□□□□ -1.5
TRIM27-204ENST00000467742 SCRN1Q12765 414 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 BAATQ14032 418 aaPredicted RBP5.67□□□□□ -1.5
TRIM27-204ENST00000467742 PKN1Q16512 942 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 ME3Q16798 604 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 NSMFQ6X4W1 530 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 ZNF765Q7L2R6 523 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 MCATQ8IVS2 390 aaKnown RBP5.67□□□□□ -1.5
TRIM27-204ENST00000467742 ABRAQ8N0Z2 381 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 SHISA5Q8N114 240 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 NECAB1Q8N987 351 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 MFSD2AQ8NA29 543 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 CHST13Q8NET6 341 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 AIFM3Q96NN9 605 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 CWC22Q9HCG8 908 aaKnown RBP5.67□□□□□ -1.5
TRIM27-204ENST00000467742 PDRG1Q9NUG6 133 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 REV1Q9UBZ9 1251 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 NAP1L2Q9ULW6 460 aaPredicted RBP5.67□□□□□ -1.5
TRIM27-204ENST00000467742 PCDHB14Q9Y5E9 798 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 OAS3Q9Y6K5 1087 aaKnown RBP5.67□□□□□ -1.5
TRIM27-204ENST00000467742 ABCB11O95342 1321 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 FRMPD4Q14CM0 1322 aa5.67□□□□□ -1.5
TRIM27-204ENST00000467742 TRIP12Q14669 1992 aaPredicted RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 SCN5AQ14524 2016 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 PTPDC1A2A3K4 754 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 RBAK-RBAKDNI3L0D1 243 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 DYNC1LI2O43237 492 aaPredicted RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 JAK2O60674 1132 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 ADAMTS4O75173 837 aa5.66□□□□□ -1.5
TRIM27-204ENST00000467742 SNAI1O95863 264 aaPredicted RBP5.66□□□□□ -1.5
TRIM27-204ENST00000467742 ZNF865P0CJ78 1059 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms