RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 INTUQ9ULD6 942 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 HEY1Q9Y5J3 304 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 UBA6A0AVT1 1052 aaPredicted RBP9.26□□□□□ -0.93
HPS4-209ENST00000466781 ASMTLO95671 621 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 SLFN14P0C7P3 912 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 HLA-DPA1P20036 260 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 TBXAS1P24557 533 aaPredicted RBP9.26□□□□□ -0.93
HPS4-209ENST00000466781 FMO2Q99518 471 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 FAM213AQ9BRX8 229 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 ANAPC7Q9UJX3 599 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 ARHGAP10A1A4S6 786 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 SFNP31947 248 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 TMPRSS15P98073 1019 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 ZNF235Q14590 738 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 C6orf118Q5T5N4 469 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 OR6J1Q8NGC5 347 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 GTF3C2Q8WUA4 911 aaPredicted RBP9.26□□□□□ -0.93
HPS4-209ENST00000466781 FAM96AQ9H5X1 160 aa9.26□□□□□ -0.93
HPS4-209ENST00000466781 DFFAO00273 331 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 IKBKBO14920 756 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 MAPK13O15264 365 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 PFDN1O60925 122 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 LARGE1O95461 756 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 NTSR2O95665 410 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 EIF3BP55884 814 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 KIF23Q02241 960 aaPredicted RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 NR5A1Q13285 461 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 TTC17Q96AE7 1141 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 PAGE5Q96GU1 130 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 AIFM3Q96NN9 605 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 POLR3FQ9H1D9 316 aaPredicted RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 RNF146Q9NTX7 359 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 TJP2Q9UDY2 1190 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 SRPRBQ9Y5M8 271 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 REREQ9P2R6 1566 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 ZBTB5O15062 677 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 CTNND1O60716 968 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 CDC25AP30304 524 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 SDC4P31431 198 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 GRIK1P39086 918 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 DEUP1Q05D60 604 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 MEI1Q5TIA1 1274 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 SPATA2LQ8IUW3 424 aaPredicted RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 TBC1D10CQ8IV04 446 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 SLC44A5Q8NCS7 719 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 NSUN7Q8NE18 718 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 ZNF560Q96MR9 790 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 BCL2L12Q9HB09 334 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 RRAGCQ9HB90 399 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 LSM7Q9UK45 103 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 A0A087WWV3 80 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 ASB14A6NK59 587 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 KIF28PB7ZC32 967 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 CETPP11597 493 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 PRAMEP78395 509 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 ZBED6P86452 979 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 PRKCQQ04759 706 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 WDR75Q8IWA0 830 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 TTC39CQ8N584 583 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 OR9Q1Q8NGQ5 310 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 RABGGTAQ92696 567 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 SPON2Q9BUD6 331 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 VPS11Q9H270 941 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 DNAJC17Q9NVM6 304 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 CNOT8Q9UFF9 292 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 DNAJC12Q9UKB3 198 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 ZC3H4Q9UPT8 1303 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 ARIH2O95376 493 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 HUNKP57058 714 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 NAALADL2Q58DX5 795 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 TMEM270Q6UE05 265 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 RRM2BQ7LG56 351 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 STX19Q8N4C7 294 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 NDST4Q9H3R1 872 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 TNS2Q63HR2 1409 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 F5H423 210 aaPredicted RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 ZNF197O14709 1029 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 ZMYND10O75800 440 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 KRT38O76015 456 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 RAP1GDS1P52306 607 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 POU5F1BQ06416 359 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 MTMR2Q13614 643 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 EFTUD2Q15029 972 aaKnown RBP eCLIP9.25□□□□□ -0.93
HPS4-209ENST00000466781 KLHL38Q2WGJ6 581 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 KHDRBS2Q5VWX1 349 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 HEATR6Q6AI08 1181 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 INTS5Q6P9B9 1019 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 PADI6Q6TGC4 694 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 CYB5R4Q7L1T6 521 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 ZFYVE19Q96K21 471 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 STRBPQ96SI9 672 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 SPTLC3Q9NUV7 552 aa9.25□□□□□ -0.93
HPS4-209ENST00000466781 APOBEC2Q9Y235 224 aaKnown RBP9.25□□□□□ -0.93
HPS4-209ENST00000466781 FRMD3A2A2Y4 597 aa9.24□□□□□ -0.93
HPS4-209ENST00000466781 SLC16A4O15374 487 aa9.24□□□□□ -0.93
HPS4-209ENST00000466781 AARSP49588 968 aaKnown RBP eCLIP9.24□□□□□ -0.93
HPS4-209ENST00000466781 MDM2Q00987 491 aaPredicted RBP9.24□□□□□ -0.93
HPS4-209ENST00000466781 PPP1R18Q6NYC8 613 aa9.24□□□□□ -0.93
HPS4-209ENST00000466781 WDR48Q8TAF3 677 aa9.24□□□□□ -0.93
HPS4-209ENST00000466781 DYDC2Q96IM9 177 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms