RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MRPL10Q7Z7H8 261 aaKnown RBP14.22□□□□□ -0.13
COL5A1-206ENST00000465877 KLHL23Q8NBE8 558 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 URGCPQ8TCY9 931 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 TBC1D13Q9NVG8 400 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 TFIP11Q9UBB9 837 aaKnown RBP14.22□□□□□ -0.13
COL5A1-206ENST00000465877 DAXXQ9UER7 740 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-206ENST00000465877 HES2Q9Y543 173 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 PCDHB12Q9Y5F1 795 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 ANK1P16157 1881 aa14.22□□□□□ -0.13
COL5A1-206ENST00000465877 MUC3AQ02505 3323 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 MYO7AQ13402 2215 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 A0A087X0B3 334 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 SFI1A8K8P3 1242 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 ZC3H11AO75152 810 aaKnown RBP eCLIP14.21□□□□□ -0.13
COL5A1-206ENST00000465877 KRT18P05783 430 aaKnown RBP14.21□□□□□ -0.13
COL5A1-206ENST00000465877 ITGA4P13612 1032 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 PLS3P13797 630 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 PBX3P40426 434 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 MLH1P40692 756 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 DNM1Q05193 864 aaKnown RBP14.21□□□□□ -0.13
COL5A1-206ENST00000465877 CSPP1Q1MSJ5 1256 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 NOMO2Q5JPE7 1267 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 TAS1R3Q7RTX0 852 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.21□□□□□ -0.13
COL5A1-206ENST00000465877 THNSL1Q8IYQ7 743 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 HACE1Q8IYU2 909 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 KCNG4Q8TDN1 519 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 SPIRE2Q8WWL2 714 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 ZNF558Q96NG5 402 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 ADPGKQ9BRR6 497 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 APOL6Q9BWW8 343 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 ALG13Q9NP73 1137 aaKnown RBP14.21□□□□□ -0.13
COL5A1-206ENST00000465877 USP20Q9Y2K6 914 aa14.21□□□□□ -0.13
COL5A1-206ENST00000465877 SLC16A4O15374 487 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 OFD1O75665 1012 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 FGF18O76093 207 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 FAM13AO94988 1023 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 PPM1AP35813 382 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 STAT6P42226 847 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 SKIV2LQ15477 1246 aaKnown RBP14.2□□□□□ -0.14
COL5A1-206ENST00000465877 RRAGBQ5VZM2 374 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 EEF1DP3Q658K8 133 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 ATL3Q6DD88 541 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 KCNT2Q6UVM3 1135 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 CCDC73Q6ZRK6 1079 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 RNF39Q9H2S5 420 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 NSUN3Q9H649 340 aaKnown RBP14.2□□□□□ -0.14
COL5A1-206ENST00000465877 TMEM134Q9H6X4 195 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 PARVGQ9HBI0 331 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 PRDM6Q9NQX0 595 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 LARSQ9P2J5 1176 aaKnown RBP14.2□□□□□ -0.14
COL5A1-206ENST00000465877 THEGQ9P2T0 379 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 PLAGL2Q9UPG8 496 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 ZDHHC9Q9Y397 364 aa14.2□□□□□ -0.14
COL5A1-206ENST00000465877 K7ERI5 159 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 INPPL1O15357 1258 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 B4GALT3O60512 393 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 CUTAO60888 179 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 TBCAO75347 108 aaKnown RBP14.19□□□□□ -0.14
COL5A1-206ENST00000465877 DNAJB1P25685 340 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 SCNN1GP51170 649 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 AFF1P51825 1210 aaKnown RBP14.19□□□□□ -0.14
COL5A1-206ENST00000465877 ZNF131P52739 623 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 SMTNP53814 917 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 NCKAP1LP55160 1127 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 UBE3AQ05086 875 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 RNASELQ05823 741 aaKnown RBP14.19□□□□□ -0.14
COL5A1-206ENST00000465877 DCAF4L1Q3SXM0 396 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 NT5DC1Q5TFE4 455 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 ATF7IP2Q5U623 682 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 TMEM161BQ8NDZ6 487 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 SPPL3Q8TCT6 385 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 POF1BQ8WVV4 589 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 ZFP42Q96MM3 310 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 MRPL4Q9BYD3 311 aaKnown RBP14.19□□□□□ -0.14
COL5A1-206ENST00000465877 GBP3Q9H0R5 595 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 UBN1Q9NPG3 1134 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 CFAP45Q9UL16 551 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 RBM19Q9Y4C8 960 aaKnown RBP14.19□□□□□ -0.14
COL5A1-206ENST00000465877 C5orf42Q9H799 3197 aa14.19□□□□□ -0.14
COL5A1-206ENST00000465877 ARL5CA6NH57 179 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 K7ENM7 598 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 RECQL4O94761 1208 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 POMCP01189 267 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 MAPTP10636 758 aaKnown RBP14.18□□□□□ -0.14
COL5A1-206ENST00000465877 AKAP5P24588 427 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 DDIT3P35638 169 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 ME1P48163 572 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 BCAR1P56945 870 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 STRN3Q13033 797 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 CAMK1Q14012 370 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 GIT2Q14161 759 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 ZNF568Q3ZCX4 644 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 AXDND1Q5T1B0 1012 aaPredicted RBP14.18□□□□□ -0.14
COL5A1-206ENST00000465877 SHC4Q6S5L8 630 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 SLC39A11Q8N1S5 342 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 PDILTQ8N807 584 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 GAD1Q99259 594 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 CDT1Q9H211 546 aa14.18□□□□□ -0.14
COL5A1-206ENST00000465877 NRDE2Q9H7Z3 1164 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms