RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 RNF14Q9UBS8 474 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 PRDM4Q9UKN5 801 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 LRRC37A2A6NM11 1700 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 BTNL10A8MVZ5 291 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 RGS20O76081 388 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 ARIH2O95376 493 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 CCND2P30279 289 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 PRKCIP41743 596 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 PAFAH1B1P43034 410 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 PTK2Q05397 1052 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 ODR4Q5SWX8 454 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 MIER3Q7Z3K6 550 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 SPATA4Q8NEY3 305 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 DIS3LQ8TF46 1054 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 CRISPLD2Q9H0B8 497 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 VIPAS39Q9H9C1 493 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 SUGCTQ9HAC7 445 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 RNF216Q9NWF9 866 aaPredicted RBP13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 GCNT4Q9P109 453 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 PCDHGC5Q9Y5F6 944 aa13.16□□□□□ -0.3
SEC61A1-203ENST00000464451 MYADML2A6NDP7 307 aa13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 P4HBP07237 508 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 TXNP10599 105 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 KLRC1P26715 233 aa13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 JAM2P57087 298 aa13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 C2orf54Q08AI8 447 aa13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 ENOX2Q16206 610 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 LY6KQ17RY6 165 aa13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 PCNX4Q63HM2 1172 aa13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 VPS36Q86VN1 386 aa13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 BANK1Q8NDB2 785 aa13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 PDE11AQ9HCR9 933 aa13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 SIX2Q9NPC8 291 aa13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 FRMD4BQ9Y2L6 1034 aa13.15□□□□□ -0.3
SEC61A1-203ENST00000464451 LOC102724159A0A0B4J2E5 919 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 DYNC1LI2O43237 492 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 MSCO60682 206 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 PALMO75781 387 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 MYBPC2Q14324 1141 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 PPP2R5AQ15172 486 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 PWP2Q15269 919 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 CFAP221Q4G0U5 840 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 IQSEC1Q6DN90 963 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 PADI6Q6TGC4 694 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 ZNF571Q7Z3V5 609 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 AGPAT3Q9NRZ7 376 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 DMAC2Q9NW81 257 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 OGDHLQ9ULD0 1010 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 UBIAD1Q9Y5Z9 338 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 ATP8B3O60423 1300 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 H3BQF6 201 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 DDX39AO00148 427 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 DHX15O43143 795 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 NCK2O43639 380 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 HIP1RO75146 1068 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 C6orf222P0C671 652 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 MAPTP10636 758 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 BEX3Q00994 111 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 ALCAMQ13740 583 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 IFI16Q16666 785 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 CCNI2Q6ZMN8 369 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 SLC9A9Q8IVB4 645 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 SCFD2Q8WU76 684 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 PKNOX2Q96KN3 472 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 STRA6Q9BX79 667 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 AGO4Q9HCK5 861 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 TBC1D22BQ9NU19 505 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 PKD2L1Q9P0L9 805 aa13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 DBR1Q9UK59 544 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-203ENST00000464451 DUSP11O75319 330 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 PPP1R37O75864 691 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 FERP16591 822 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 CXCR5P32302 372 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 FMO5P49326 533 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 SP2Q02086 613 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 MAPK7Q13164 816 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 TTLL4Q14679 1199 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 HSP90B2PQ58FF3 399 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 TLK2Q86UE8 772 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 FMNL3Q8IVF7 1028 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 SYCP3Q8IZU3 236 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 PAWRQ96IZ0 340 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 PSMB7Q99436 277 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 PACSIN1Q9BY11 444 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 LARSQ9P2J5 1176 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 NAGPAQ9UK23 515 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 GNEQ9Y223 722 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 DAAM1Q9Y4D1 1078 aa13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 MKI67P46013 3256 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-203ENST00000464451 RBM47A0AV96 593 aaKnown RBP13.12□□□□□ -0.31
SEC61A1-203ENST00000464451 LRRIQ3A6PVS8 624 aaPredicted RBP13.12□□□□□ -0.31
SEC61A1-203ENST00000464451 GFPT2O94808 682 aa13.12□□□□□ -0.31
SEC61A1-203ENST00000464451 FARP2O94887 1054 aaPredicted RBP13.12□□□□□ -0.31
SEC61A1-203ENST00000464451 LYPLA2O95372 231 aa13.12□□□□□ -0.31
SEC61A1-203ENST00000464451 STAT1P42224 750 aa13.12□□□□□ -0.31
SEC61A1-203ENST00000464451 QARSP47897 775 aaKnown RBP13.12□□□□□ -0.31
SEC61A1-203ENST00000464451 CYP2J2P51589 502 aa13.12□□□□□ -0.31
SEC61A1-203ENST00000464451 MTMR1Q13613 665 aa13.12□□□□□ -0.31
SEC61A1-203ENST00000464451 DUSP28Q4G0W2 176 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms