RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 ATP8A1Q9Y2Q0 1164 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 FAM205AQ6ZU69 1335 aa7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 COL5A2P05997 1499 aaPredicted RBP7.75□□□□□ -1.17
CLSTN1-204ENST00000464286 NHSL1Q5SYE7 1610 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 CICQ96RK0 1608 aaPredicted RBP7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 ITGB4P16144 1822 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 LRRD1A4D1F6 860 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 PHF20L1A8MW92 1017 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 KLRF2D3W0D1 207 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 RASGRF2O14827 1237 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 EPHB6O15197 1021 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 SNX3O60493 162 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 PHF2O75151 1096 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 DCTN3O75935 186 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 NOL4O94818 638 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 GSTA2P09210 222 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 GAP43P17677 238 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 TMOD1P28289 359 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 TXKP42681 527 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 DNA2P51530 1060 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 EVA1CP58658 441 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 CETN1Q12798 172 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 STRN3Q13033 797 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 TRAF1Q13077 416 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 USP4Q13107 963 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 MAPK7Q13164 816 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 GRB10Q13322 594 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 ADAM9Q13443 819 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 ACVR2BQ13705 512 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 BLMHQ13867 455 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 LBRQ14739 615 aaKnown RBP7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 KIAA1755Q5JYT7 1200 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 SEL1L2Q5TEA6 688 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 RNF43Q68DV7 783 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 DUPD1Q68J44 220 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 C11orf63Q6NUN7 778 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 RIPOR1Q6ZS17 1223 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 INTS8Q75QN2 995 aaKnown RBP7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 BZW1Q7L1Q6 419 aaKnown RBP7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 DZIP1Q86YF9 867 aaKnown RBP7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 MFN1Q8IWA4 741 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 RIBC1Q8N443 379 aaPredicted RBP7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 FAM133AQ8N9E0 248 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 INPP5DQ92835 1189 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 SPDL1Q96EA4 605 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 GAS2L1Q99501 681 aaPredicted RBP7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 PLIN2Q99541 437 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 DDX47Q9H0S4 455 aaKnown RBP7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 GANQ9H2C0 597 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 BLOC1S4Q9NUP1 217 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 SMARCAL1Q9NZC9 954 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 CTTNBP2NLQ9P2B4 639 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 PCYOX1Q9UHG3 505 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 AMACRQ9UHK6 382 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 MAD2L2Q9UI95 211 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 TRAF3IP3Q9Y228 551 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 STXBP5LQ9Y2K9 1186 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 ACTL7BQ9Y614 415 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 PHLPP1O60346 1717 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 UBE4BO95155 1302 aa7.74□□□□□ -1.17
CLSTN1-204ENST00000464286 ZSCAN5CA6NGD5 496 aaPredicted RBP7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 F8W031 263 aaPredicted RBP7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 PDXKO00764 312 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 TTI1O43156 1089 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 TLR2O60603 784 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 ATP2C2O75185 946 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 GJB6O95452 261 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 STAU1O95793 577 aaKnown RBP7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 FGGP02679 453 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 FESP07332 822 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 UCHL3P15374 230 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 PAX7P23759 505 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 CNGA1P29973 690 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 BNIP1Q12981 228 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 DYNC1I2Q13409 638 aaKnown RBP7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 HLFQ16534 295 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 NFIL3Q16649 462 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 ASPRV1Q53RT3 343 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 HERC4Q5GLZ8 1057 aaPredicted RBP7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 WASHC2DQ5SRD0 308 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 C12orf60Q5U649 245 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 SLC30A9Q6PML9 568 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 TAS1R3Q7RTX0 852 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 SPATA21Q7Z572 469 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 IRF2BP2Q7Z5L9 587 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 TBC1D1Q86TI0 1168 aaPredicted RBP7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 NT5DC3Q86UY8 548 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 FAM228AQ86W67 206 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 SLFN12Q8IYM2 578 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 ANKRD35Q8N283 1001 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 WDR66Q8TBY9 1149 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 MICAL1Q8TDZ2 1067 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 TBCKQ8TEA7 893 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 GRK7Q8WTQ7 553 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 NSUN4Q96CB9 384 aaKnown RBP7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 ACSBG1Q96GR2 724 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 PNMA5Q96PV4 448 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 TMEM237Q96Q45 408 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 RPS6KC1Q96S38 1066 aa7.73□□□□□ -1.17
CLSTN1-204ENST00000464286 ELAC2Q9BQ52 826 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms