RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 TSPY1Q01534 308 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 GOLGA8FQ08AF8 430 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 GOLGA8DPQ0D2H9 430 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 VGLL4Q14135 290 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 OR6B2Q6IFH4 312 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 SAAL1Q96ER3 474 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 VPS18Q9P253 973 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 KRT7P08729 469 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 GNA15P30679 374 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 ITIH3Q06033 890 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 SLMAPQ14BN4 828 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 HYIQ5T013 277 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 TMEM270Q6UE05 265 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 REM2Q8IYK8 340 aaPredicted RBP12.6□□□□□ -0.39
RBM39-223ENST00000463004 TNFRSF25Q93038 417 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 TMEM143Q96AN5 459 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 PNMA5Q96PV4 448 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 RUSC1Q9BVN2 902 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 DDX56Q9NY93 547 aaKnown RBP12.6□□□□□ -0.39
RBM39-223ENST00000463004 MEIS2O14770 477 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 MCF2LO15068 1137 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 OGTO15294 1046 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 CD58P19256 250 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 SGO2Q562F6 1265 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 NOL9Q5SY16 702 aaKnown RBP12.6□□□□□ -0.39
RBM39-223ENST00000463004 SELENOSQ9BQE4 189 aa12.6□□□□□ -0.39
RBM39-223ENST00000463004 TJP3O95049 919 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 LYPLA2O95372 231 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 TRIM49P0CI25 452 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 TRIM49CP0CI26 452 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 CAV1Q03135 178 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 EFCAB12Q6NXP0 572 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 C12orf42Q96LP6 360 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 PLAGL2Q9UPG8 496 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 PCDHB2Q9Y5E7 798 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 KRT1P04264 644 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 ZNF18P17022 549 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 CCZ1BP86790 482 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 CCZ1P86791 482 aaPredicted RBP12.59□□□□□ -0.39
RBM39-223ENST00000463004 IQSEC1Q6DN90 963 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 NOTUMQ6P988 496 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 EMBQ6PCB8 327 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 OTUD6BQ8N6M0 293 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 TC2NQ8N9U0 490 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 FAM149B1Q96BN6 582 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 KIAA1257Q9ULG3 409 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 PDHXO00330 501 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 MAPK13O15264 365 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 TRAPPC3O43617 180 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 PPFIA4O75335 1185 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 CYP2C9P11712 490 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 PRPSAP1Q14558 356 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 PLA2G4FQ68DD2 849 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 PCSK9Q8NBP7 692 aaKnown RBP12.59□□□□□ -0.39
RBM39-223ENST00000463004 STAP1Q9ULZ2 295 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 KBTBD13C9JR72 458 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 FAM86B1E9PN63 330 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 TOM1L1O75674 476 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 FAM86B2P0C5J1 330 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 CAPN2P17655 700 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 RARRES1P49788 294 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 HSD17B4P51659 736 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 TMEM132DQ14C87 1099 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 PCBP1Q15365 356 aaKnown RBP eCLIP12.59□□□□□ -0.39
RBM39-223ENST00000463004 EARS2Q5JPH6 523 aaKnown RBP12.59□□□□□ -0.39
RBM39-223ENST00000463004 KLHDC7AQ5VTJ3 777 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 RNF180Q86T96 592 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 P2RX7Q99572 595 aaKnown RBP12.59□□□□□ -0.39
RBM39-223ENST00000463004 TRIM31Q9BZY9 425 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 SAMD15Q9P1V8 674 aa12.59□□□□□ -0.39
RBM39-223ENST00000463004 TYW5A2RUC4 315 aaKnown RBP12.58□□□□□ -0.4
RBM39-223ENST00000463004 EBAG9O00559 213 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 SRGAP2BP0DMP2 458 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 PTGER2P43116 358 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 NCOA4Q13772 614 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 NAB2Q15742 525 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 B4GALNT4Q76KP1 1039 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 GPIHBP1Q8IV16 184 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 ATRIPQ8WXE1 791 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 KIF12Q96FN5 646 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 A1CFQ9NQ94 594 aaKnown RBP12.58□□□□□ -0.4
RBM39-223ENST00000463004 GLTPD2A6NH11 291 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 SPDYE5A6NIY4 337 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 PSMD10O75832 226 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 ZRANB2O95218 330 aaKnown RBP eCLIP12.58□□□□□ -0.44e-8■■■■■ 32.7
RBM39-223ENST00000463004 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 ERVK-24P63145 666 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 KIAA1841Q6NSI8 718 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 ZPBP2Q6X784 338 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 ATP2A3Q93084 1043 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 PARVAQ9NVD7 372 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 C4BP0C0L5 1744 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 SLITRK3O94933 977 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 NPEPPSP55786 919 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 RTP1P59025 263 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 RSRC2Q7L4I2 434 aaKnown RBP12.58□□□□□ -0.4
RBM39-223ENST00000463004 RFX6Q8HWS3 928 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 DNAJC7Q99615 494 aa12.58□□□□□ -0.4
RBM39-223ENST00000463004 ZMYM2Q9UBW7 1377 aa12.57□□□□□ -0.4
RBM39-223ENST00000463004 SLC15A5A6NIM6 579 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms