RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 ZNF507Q8TCN5 953 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 USP6NLQ92738 828 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 XPO6Q96QU8 1125 aaKnown RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 RAB17Q9H0T7 212 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 FOXP1Q9H334 677 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 DMAP1Q9NPF5 467 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 RMND1Q9NWS8 449 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 BARHL2Q9NY43 387 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 MAP3K20Q9NYL2 800 aaKnown RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 CYP39A1Q9NYL5 469 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 NFU1Q9UMS0 254 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 GABRQQ9UN88 632 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 RPL26L1Q9UNX3 145 aaKnown RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 PTPN22Q9Y2R2 807 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 L3MBTL1Q9Y468 752 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 SLC4A7Q9Y6M7 1214 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 RBBP6Q7Z6E9 1792 aaKnown RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 HEXIM1O94992 359 aaKnown RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 ACADSP16219 412 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 CARSP49589 748 aaKnown RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 UBXN1Q04323 297 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 GALNTL6Q49A17 601 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 GPKOWQ92917 476 aaPredicted RBP eCLIP12.39□□□□□ -0.433e-6■□□□□ 9.4
TRAPPC3-205ENST00000462715 ZNF317Q96PQ6 595 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 LACRTQ9GZZ8 138 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 NHEJ1Q9H9Q4 299 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 ARHGEF3Q9NR81 526 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 DIS3Q9Y2L1 958 aaKnown RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 PGK2P07205 417 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 CYP2B6P20813 491 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 TNNC1P63316 161 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 SLC7A5Q01650 507 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 PAK1Q13153 545 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 BAATQ14032 418 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 SAFBQ15424 915 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 GNPTABQ3T906 1256 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 FBXO46Q6PJ61 603 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 SLAIN1Q8ND83 568 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 GLT8D2Q9H1C3 349 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 THAP9Q9H5L6 903 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 EPB41L5Q9HCM4 733 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 SAMD15Q9P1V8 674 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 DNAJC25-GNG10A0A024R161 153 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 CFBP00751 764 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 POLR2MP0CAP2 368 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 XBP1P17861 261 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 CALML3P27482 149 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 HPDP32754 393 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 RPS6P62753 249 aaKnown RBP12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 TMED1Q13445 227 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 PKN1Q16512 942 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 DBN1Q16643 649 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 PPP1R15BQ5SWA1 713 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 ACBD5Q5T8D3 534 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 LCA5Q86VQ0 697 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 TLCD1Q96CP7 247 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 PAGE5Q96GU1 130 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 RAB3IPQ96QF0 476 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 TTYH3Q9C0H2 523 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 SH3GLB2Q9NR46 395 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 ATXN10Q9UBB4 475 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 C2CD2Q9Y426 696 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 PTCH2Q9Y6C5 1203 aa12.38□□□□□ -0.43
TRAPPC3-205ENST00000462715 DOCK3Q8IZD9 2030 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 ADCY3O60266 1144 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 COBLO75128 1261 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 HIP1RO75146 1068 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 GLI1P08151 1106 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 CCT6AP40227 531 aaKnown RBP12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 GHRHRQ02643 423 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 KLC1Q07866 573 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 ZNF792Q3KQV3 632 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 ANO7Q6IWH7 933 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 IRGCQ6NXR0 463 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 SLC30A10Q6XR72 485 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 TBC1D1Q86TI0 1168 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 PXYLP1Q8TE99 480 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 MPHOSPH6Q99547 160 aaKnown RBP12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 VPS16Q9H269 839 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 VCX3BQ9H321 246 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 PSTPIP2Q9H939 334 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 VCX3AQ9NNX9 186 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 CIDEBQ9UHD4 219 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 SMCHD1A6NHR9 2005 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 O00370 1275 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 FAM153BP0C7A2 387 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 HSD17B3P37058 310 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 HSD17B4P51659 736 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 ZNF844Q08AG5 666 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 FAM153CQ494X1 144 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 ODF2Q5BJF6 829 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 ZNF467Q7Z7K2 595 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 FAM133AQ8N9E0 248 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 FBF1Q8TES7 1133 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 MAIP1Q8WWC4 291 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 CASKIN2Q8WXE0 1202 aa12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.37□□□□□ -0.432e-12■■■■■ 298.1
TRAPPC3-205ENST00000462715 RBM12Q9NTZ6 932 aaKnown RBP12.37□□□□□ -0.43
TRAPPC3-205ENST00000462715 CTTNBP2NLQ9P2B4 639 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms