RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 NIPA1Q7RTP0 329 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 CCAR1Q8IX12 1150 aaKnown RBP6.56□□□□□ -1.36
VPS36-202ENST00000462289 NECAB1Q8N987 351 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 CCDC148Q8NFR7 591 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 CUL5Q93034 780 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 LENG9Q96B70 501 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 SENP7Q9BQF6 1050 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 ZC3H7BQ9UGR2 993 aaKnown RBP6.56□□□□□ -1.36
VPS36-202ENST00000462289 CTDP1Q9Y5B0 961 aaPredicted RBP6.56□□□□□ -1.36
VPS36-202ENST00000462289 UBIAD1Q9Y5Z9 338 aa6.56□□□□□ -1.36
VPS36-202ENST00000462289 DDX49Q9Y6V7 483 aaKnown RBP6.56□□□□□ -1.36
VPS36-202ENST00000462289 SYNRGQ9UMZ2 1314 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 TMEM238LA0A1B0GVL6 79 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 PTPDC1A2A3K4 754 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 SMCO2A6NFE2 343 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 DNM1LO00429 736 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 MEIS1O00470 390 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 MAFGO15525 162 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 JAK2O60674 1132 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 ARIH2O95376 493 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 CFBP00751 764 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 ITGB5P18084 799 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 CALML3P27482 149 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 GNA11P29992 359 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 ADCY7P51828 1080 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 HMGN5P82970 282 aaKnown RBP6.55□□□□□ -1.36
VPS36-202ENST00000462289 SP2Q02086 613 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 SSRP1Q08945 709 aaKnown RBP6.55□□□□□ -1.36
VPS36-202ENST00000462289 STXBP2Q15833 593 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 PRAMEF19Q5SWL8 479 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 TMEM63BQ5T3F8 832 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 WDR78Q5VTH9 848 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 OGFOD3Q6PK18 319 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 CPLX2Q6PUV4 134 aaKnown RBP6.55□□□□□ -1.36
VPS36-202ENST00000462289 B3GNT9Q6UX72 402 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 HEATR3Q7Z4Q2 680 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 SLC43A3Q8NBI5 491 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 FBXO18Q8NFZ0 1043 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 SCFD2Q8WU76 684 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 CCDC12Q8WUD4 166 aaPredicted RBP6.55□□□□□ -1.36
VPS36-202ENST00000462289 GPRASP2Q96D09 838 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 INTS4Q96HW7 963 aaKnown RBP6.55□□□□□ -1.36
VPS36-202ENST00000462289 DMRTB1Q96MA1 342 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 AIFM3Q96NN9 605 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 SLC26A6Q9BXS9 759 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 RBCK1Q9BYM8 510 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 PDGFCQ9NRA1 345 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 VPS54Q9P1Q0 977 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 ORC3Q9UBD5 711 aaPredicted RBP6.55□□□□□ -1.36
VPS36-202ENST00000462289 DDX41Q9UJV9 622 aaKnown RBP6.55□□□□□ -1.36
VPS36-202ENST00000462289 FAM184BQ9ULE4 1060 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 PCDHA4Q9UN74 947 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 CNPY2Q9Y2B0 182 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 TANC1Q9C0D5 1861 aa6.55□□□□□ -1.36
VPS36-202ENST00000462289 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.54□□□□□ -1.36
VPS36-202ENST00000462289 B4DLN1 442 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 CPLX1O14810 134 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 TMPRSS2O15393 492 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 DYNC1LI2O43237 492 aaPredicted RBP6.54□□□□□ -1.36
VPS36-202ENST00000462289 MMP1P03956 469 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 KCNA2P16389 499 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 EN2P19622 333 aaPredicted RBP6.54□□□□□ -1.36
VPS36-202ENST00000462289 U2AF2P26368 475 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS36-202ENST00000462289 CCND2P30279 289 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 HOXC8P31273 242 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 ADCYAP1R1P41586 468 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 NAPAP54920 295 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 ARHGAP1Q07960 439 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 FAAP100Q0VG06 881 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 STK3Q13188 491 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 LRRC41Q15345 812 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 UBE2SQ16763 222 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 KCNV1Q6PIU1 500 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 FBXO16Q8IX29 292 aaPredicted RBP6.54□□□□□ -1.36
VPS36-202ENST00000462289 REXO1Q8N1G1 1221 aaKnown RBP6.54□□□□□ -1.36
VPS36-202ENST00000462289 BICD2Q8TD16 824 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 WASF1Q92558 559 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 DEFB118Q96PH6 123 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 ANO3Q9BYT9 981 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 C6orf50Q9HD87 102 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 JADE2Q9NQC1 790 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 GJB4Q9NTQ9 266 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 CRIM1Q9NZV1 1036 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 ISY1Q9ULR0 285 aaKnown RBP6.54□□□□□ -1.36
VPS36-202ENST00000462289 PCDHA6Q9UN73 950 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 PCDHGC5Q9Y5F6 944 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 PCDHA8Q9Y5H6 950 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 SIP14410 1827 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 ARID2Q68CP9 1835 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 TCHHQ07283 1943 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 LOXHD1Q8IVV2 1947 aa6.54□□□□□ -1.36
VPS36-202ENST00000462289 NFASCO94856 1347 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 IGKV6D-21A0A0A0MT36 114 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 MYADML2A6NDP7 307 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 FAM86B1E9PN63 330 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 HAS3O00219 553 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 FIBPO43427 364 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 FARP2O94887 1054 aaPredicted RBP6.53□□□□□ -1.36
VPS36-202ENST00000462289 FAM86B2P0C5J1 330 aa6.53□□□□□ -1.36
VPS36-202ENST00000462289 RARBP10826 455 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms