RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, human

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCNM1-204	ENST00000461862	ANKRD35	Q8N283	1001 aa		11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	SYT2	Q8N9I0	419 aa	Predicted RBP	11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	NOC3L	Q8WTT2	800 aa	Known RBP	11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	NELFB	Q8WX92	580 aa		11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	DNAJC19	Q96DA6	116 aa		11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	MPHOSPH6	Q99547	160 aa	Known RBP	11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	MROH8	Q9H579	483 aa		11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	FANCL	Q9NW38	375 aa		11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	ADD3	Q9UEY8	706 aa	Known RBP	11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	CTNND2	Q9UQB3	1225 aa		11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	GDA	Q9Y2T3	454 aa		11.43	□□□□□ -0.58
SCNM1-204	ENST00000461862	PLXNB2	O15031	1838 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	FRMD3	A2A2Y4	597 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862		E9PMD0	336 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	DHX15	O43143	795 aa	Known RBP	11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	CHMP2A	O43633	222 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	KIF20A	O95235	890 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	SSB	P05455	408 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	CYP11B2	P19099	503 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	BRD2	P25440	801 aa	Known RBP	11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	ITGB3BP	Q13352	177 aa	Predicted RBP	11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	TPD52L1	Q16890	204 aa	Predicted RBP	11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	CDKAL1	Q5VV42	579 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	ANKRD23	Q86SG2	305 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	NCAPG2	Q86XI2	1143 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	DRC7	Q8IY82	874 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	TTC9	Q92623	222 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	LENG1	Q96BZ8	264 aa	Predicted RBP	11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	DYDC2	Q96IM9	177 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	UIMC1	Q96RL1	719 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	MED15	Q96RN5	788 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	CTAGE1	Q96RT6	745 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	SENP7	Q9BQF6	1050 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	PAGR1	Q9BTK6	254 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	SMG9	Q9H0W8	520 aa	Known RBP	11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	TXNRD2	Q9NNW7	524 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	KCND2	Q9NZV8	630 aa		11.42	□□□□□ -0.58
SCNM1-204	ENST00000461862	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	WDR64	B1ANS9	1081 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	CA12	O43570	354 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	DKC1	O60832	514 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	EIF3J	O75822	258 aa	Known RBP	11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	SLITRK3	O94933	977 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	LYPLA2	O95372	231 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	SERPINC1	P01008	464 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	KRT18	P05783	430 aa	Known RBP	11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	P4HB	P07237	508 aa	Known RBP	11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	IDE	P14735	1019 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	EDNRB	P24530	442 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	CCNE1	P24864	410 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	ICAM3	P32942	547 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	GCLC	P48506	637 aa	Predicted RBP	11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	CTCF	P49711	727 aa	Predicted RBP	11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	ALDH5A1	P51649	535 aa	Predicted RBP	11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	UBASH3A	P57075	661 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	ERVK-24	P63145	666 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	CCNA1	P78396	465 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	CYP4A11	Q02928	519 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	COASY	Q13057	564 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	STXBP2	Q15833	593 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	FAM26F	Q5R3K3	315 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	DYM	Q7RTS9	669 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	GUF1	Q8N442	669 aa	Known RBP	11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	FAM133A	Q8N9E0	248 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	ANKRD20A12P	Q8NF67	263 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	CD99L2	Q8TCZ2	262 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	P2RX5	Q93086	422 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	LXN	Q9BS40	222 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	XPO4	Q9C0E2	1151 aa	Known RBP	11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	ZSWIM4	Q9H7M6	989 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	PANK4	Q9NVE7	773 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	RGL1	Q9NZL6	768 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	IFNK	Q9P0W0	207 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	IMPACT	Q9P2X3	320 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	RBPJL	Q9UBG7	517 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	MYH11	P35749	1972 aa		11.41	□□□□□ -0.58
SCNM1-204	ENST00000461862	PLXNA1	Q9UIW2	1896 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	ARID2	Q68CP9	1835 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	ZNF236	Q9UL36	1845 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	DYRK3	O43781	588 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	HOXD8	P13378	290 aa	Predicted RBP	11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	ATP1A3	P13637	1013 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	KCNA2	P16389	499 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	GAP43	P17677	238 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	ERCC3	P19447	782 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	CDK11B	P21127	795 aa	Known RBP	11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	QARS	P47897	775 aa	Known RBP	11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	STX17	P56962	302 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	GSDMD	P57764	484 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	CTTN	Q14247	550 aa	Known RBP	11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	TTI2	Q6NXR4	508 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	C17orf99	Q6UX52	265 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	ZSCAN30	Q86W11	494 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	TPH2	Q8IWU9	490 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	KIAA0895	Q8NCT3	520 aa		11.4	□□□□□ -0.58
SCNM1-204	ENST00000461862	CCDC97	Q96F63	343 aa	Predicted RBP	11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms