RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 GSTM4Q03013 218 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 HYAL1Q12794 435 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 CPSF6Q16630 551 aaKnown RBP eCLIP5.86□□□□□ -1.47
BRCA1-206ENST00000461574 PLEKHG4Q58EX7 1191 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 OGFOD2Q6N063 350 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 CCDC62Q6P9F0 684 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 BTNL9Q6UXG8 535 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 BMP8AQ7Z5Y6 402 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 VSIG10LQ86VR7 867 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 MCF2L2Q86YR7 1114 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 TP53INP2Q8IXH6 220 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 SIRT2Q8IXJ6 389 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 PPTC7Q8NI37 304 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 KAT2BQ92831 832 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 APBB2Q92870 758 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 ATP6V0A1Q93050 837 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 IL17RAQ96F46 866 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 SPATA33Q96N06 139 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 TBC1D32Q96NH3 1257 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 CTAGE1Q96RT6 745 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 IWS1Q96ST2 819 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 RMDN3Q96TC7 470 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 SEC62Q99442 399 aaKnown RBP5.86□□□□□ -1.47
BRCA1-206ENST00000461574 SOX17Q9H6I2 414 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-206ENST00000461574 LATS2Q9NRM7 1088 aa5.86□□□□□ -1.47
BRCA1-206ENST00000461574 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.86□□□□□ -1.47
BRCA1-206ENST00000461574 DOCK5Q9H7D0 1870 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 ABCB11O95342 1321 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 FAM170BA6NMN3 283 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 METTL12A8MUP2 240 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 NOP56O00567 594 aaKnown RBP5.85□□□□□ -1.47
BRCA1-206ENST00000461574 LINC01565O15544 149 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 CYP26A1O43174 497 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 PHACTR2O75167 634 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 TBX10O75333 385 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 EIF3JO75822 258 aaKnown RBP5.85□□□□□ -1.47
BRCA1-206ENST00000461574 RB1P06400 928 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 GOLGA8HP0CJ92 632 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 PDHBP11177 359 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 GNAT1P11488 350 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 EDN3P14138 238 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 LTBRP36941 435 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 SOX4Q06945 474 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-206ENST00000461574 DLX2Q07687 328 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-206ENST00000461574 ZNF543Q08ER8 600 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 MTMR3Q13615 1198 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 BTG3Q14201 252 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-206ENST00000461574 CDC37Q16543 378 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-206ENST00000461574 TRIM71Q2Q1W2 868 aaKnown RBP5.85□□□□□ -1.47
BRCA1-206ENST00000461574 GPATCH4Q5T3I0 446 aaKnown RBP5.85□□□□□ -1.47
BRCA1-206ENST00000461574 PEAR1Q5VY43 1037 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-206ENST00000461574 ZAR1Q86SH2 424 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 SERINC5Q86VE9 423 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 GATA6Q92908 595 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 TOP1MTQ969P6 601 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 TAAR1Q96RJ0 339 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 TMEM47Q9BQJ4 181 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 BHLHE41Q9C0J9 482 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-206ENST00000461574 MLXIPQ9HAP2 919 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 INCENPQ9NQS7 918 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 ZBTB40Q9NUA8 1239 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 FOXD3Q9UJU5 478 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-206ENST00000461574 DDX41Q9UJV9 622 aaKnown RBP5.85□□□□□ -1.47
BRCA1-206ENST00000461574 MYO15AQ9UKN7 3530 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 PLXNA3P51805 1871 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 PLXNA4Q9HCM2 1894 aa5.85□□□□□ -1.47
BRCA1-206ENST00000461574 LAMA4Q16363 1823 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 C5orf67F2Z3F1 127 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 H0Y858 1186 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 H3BRB1 525 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 RBAK-RBAKDNI3L0D1 243 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 CCER2I3L3R5 266 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 HAS3O00219 553 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 GRM6O15303 877 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 ORC4O43929 436 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 CAND2O75155 1236 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 PPFIA4O75335 1185 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 GGPS1O95749 300 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 CFBP00751 764 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 MMP1P03956 469 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 HSPD1P10809 573 aaKnown RBP5.84□□□□□ -1.47
BRCA1-206ENST00000461574 MYCLP12524 364 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-206ENST00000461574 GTF2F1P35269 517 aaKnown RBP eCLIP5.84□□□□□ -1.47
BRCA1-206ENST00000461574 BMPR1AP36894 532 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 VCPP55072 806 aaKnown RBP5.84□□□□□ -1.47
BRCA1-206ENST00000461574 ZXDAP98168 799 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 SIGLEC14Q08ET2 396 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 TCF15Q12870 199 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 KCNV1Q6PIU1 500 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 RGS22Q8NE09 1264 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 SYTL5Q8TDW5 730 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-206ENST00000461574 EZH1Q92800 747 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-206ENST00000461574 RPGRIP1Q96KN7 1286 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 NRSN2Q9GZP1 204 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 UBA5Q9GZZ9 404 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 TUT1Q9H6E5 874 aaKnown RBP5.84□□□□□ -1.47
BRCA1-206ENST00000461574 ALG13Q9NP73 1137 aaKnown RBP5.84□□□□□ -1.47
BRCA1-206ENST00000461574 PXMP2Q9NR77 195 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 TLR9Q9NR96 1032 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms