RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 MBD3O95983 291 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 ABCD1P33897 745 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 ALCAMQ13740 583 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 ATF7IP2Q5U623 682 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 NOTUMQ6P988 496 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 SLC24A5Q71RS6 500 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 TMCO2Q7Z6W1 182 aaPredicted RBP12.38□□□□□ -0.43
SSBP1-202ENST00000461433 SMARCE1Q969G3 411 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 ZBTB45Q96K62 511 aaPredicted RBP12.38□□□□□ -0.43
SSBP1-202ENST00000461433 MRPL4Q9BYD3 311 aaKnown RBP12.38□□□□□ -0.43
SSBP1-202ENST00000461433 HAPLN2Q9GZV7 340 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 MAN1B1Q9UKM7 699 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 TNFSF13BQ9Y275 285 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 GDAQ9Y2T3 454 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
SSBP1-202ENST00000461433 ZMYM2Q9UBW7 1377 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 LAMA2P24043 3122 aaKnown RBP12.37□□□□□ -0.43
SSBP1-202ENST00000461433 COL4A6Q14031 1691 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 TISP43B9A030 160 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 ANKRD63C9JTQ0 380 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 EIF3DO15371 548 aaKnown RBP eCLIP12.37□□□□□ -0.43
SSBP1-202ENST00000461433 SMC2O95347 1197 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 ATF7P17544 494 aaPredicted RBP12.37□□□□□ -0.43
SSBP1-202ENST00000461433 BMP6P22004 513 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 NCBP1Q09161 790 aaKnown RBP12.37□□□□□ -0.43
SSBP1-202ENST00000461433 BMT2Q1RMZ1 405 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 PRPF38BQ5VTL8 546 aaKnown RBP12.37□□□□□ -0.43
SSBP1-202ENST00000461433 TWF2Q6IBS0 349 aaKnown RBP12.37□□□□□ -0.43
SSBP1-202ENST00000461433 SLC27A1Q6PCB7 646 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 ZPBP2Q6X784 338 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 ZNF598Q86UK7 904 aaKnown RBP12.37□□□□□ -0.43
SSBP1-202ENST00000461433 ECHDC2Q86YB7 292 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 SMG8Q8ND04 991 aaKnown RBP12.37□□□□□ -0.43
SSBP1-202ENST00000461433 TOP1MTQ969P6 601 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 CCDC51Q96ER9 411 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 RNPC3Q96LT9 517 aaKnown RBP12.37□□□□□ -0.43
SSBP1-202ENST00000461433 NUP62CLQ9H1M0 184 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 C1orf112Q9NSG2 853 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 FAM105AQ9NUU6 356 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 COLQQ9Y215 455 aaPredicted RBP12.37□□□□□ -0.43
SSBP1-202ENST00000461433 GBF1Q92538 1859 aa12.37□□□□□ -0.43
SSBP1-202ENST00000461433 ZBBXA8MT70 800 aa12.36□□□□□ -0.43
SSBP1-202ENST00000461433 N4BP3O15049 544 aa12.36□□□□□ -0.43
SSBP1-202ENST00000461433 ZNF623O75123 536 aa12.36□□□□□ -0.43
SSBP1-202ENST00000461433 TOM1L1O75674 476 aa12.36□□□□□ -0.43
SSBP1-202ENST00000461433 ZNF658Q5TYW1 1059 aaPredicted RBP12.36□□□□□ -0.43
SSBP1-202ENST00000461433 FAM109BQ6ICB4 259 aaPredicted RBP12.36□□□□□ -0.43
SSBP1-202ENST00000461433 MRPL10Q7Z7H8 261 aaKnown RBP12.36□□□□□ -0.43
SSBP1-202ENST00000461433 SMYD4Q8IYR2 804 aaPredicted RBP12.36□□□□□ -0.43
SSBP1-202ENST00000461433 TDHQ8IZJ6 230 aa12.36□□□□□ -0.43
SSBP1-202ENST00000461433 ACCSQ96QU6 501 aa12.36□□□□□ -0.43
SSBP1-202ENST00000461433 RMND1Q9NWS8 449 aa12.36□□□□□ -0.43
SSBP1-202ENST00000461433 PCDHB2Q9Y5E7 798 aa12.36□□□□□ -0.43
SSBP1-202ENST00000461433 STYXL1Q9Y6J8 313 aa12.36□□□□□ -0.43
SSBP1-202ENST00000461433 SLC4A7Q9Y6M7 1214 aa12.36□□□□□ -0.43
SSBP1-202ENST00000461433 MEIS3P2A8K0S8 358 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 HNRNPDLO14979 420 aaKnown RBP12.35□□□□□ -0.43
SSBP1-202ENST00000461433 TGFB1I1O43294 461 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 NPTXRO95502 500 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 AMHP03971 560 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 ADSSP30520 456 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 KCNJ6P48051 423 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 MORC3Q14149 939 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 ISM2Q6H9L7 571 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 RBM43Q6ZSC3 357 aaKnown RBP12.35□□□□□ -0.43
SSBP1-202ENST00000461433 STXBP4Q6ZWJ1 553 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 MYOCDQ8IZQ8 938 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 PHOSPHO2Q8TCD6 241 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 CCDC47Q96A33 483 aaKnown RBP12.35□□□□□ -0.43
SSBP1-202ENST00000461433 CDT1Q9H211 546 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 ELAC1Q9H777 363 aaKnown RBP12.35□□□□□ -0.43
SSBP1-202ENST00000461433 TMEM206Q9H813 350 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 RNF19AQ9NV58 838 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 TMEM63CQ9P1W3 806 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 HES2Q9Y543 173 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 IPPQ9Y573 584 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 FNDC1Q4ZHG4 1894 aaPredicted RBP12.35□□□□□ -0.43
SSBP1-202ENST00000461433 UBE4BO95155 1302 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 GRXCR1A8MXD5 290 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 BIN1O00499 593 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 FAM189A1O60320 539 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 EOMESO95936 686 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 LIG4P49917 911 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 RAB27AP51159 221 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 MCL1Q07820 350 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 NFKBIBQ15653 356 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 KLHL40Q2TBA0 621 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 COBLL1Q53SF7 1204 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 MPZL3Q6UWV2 235 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 NPAS4Q8IUM7 802 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 NELFCDQ8IXH7 590 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 BICD1Q96G01 975 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 SLC9A7Q96T83 725 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 MTIF3Q9H2K0 278 aaKnown RBP12.35□□□□□ -0.43
SSBP1-202ENST00000461433 KCTD10Q9H3F6 313 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 NXF3Q9H4D5 531 aaKnown RBP12.35□□□□□ -0.43
SSBP1-202ENST00000461433 TMEM161AQ9NX61 479 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 EXOC7Q9UPT5 735 aa12.35□□□□□ -0.43
SSBP1-202ENST00000461433 MAPK8IP1Q9UQF2 711 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms