RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 PCDHB8Q9UN66 801 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 H0YC42 278 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 UBXN8O00124 270 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 NR3C1P04150 777 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 MARK3P27448 753 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 LAMB3Q13751 1172 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 DHX34Q14147 1143 aaKnown RBP9.52□□□□□ -0.89
BRCA1-205ENST00000461221 ZNF568Q3ZCX4 644 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 TMEM270Q6UE05 265 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 ZBED8Q8IZ13 594 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 TUBGCP3Q96CW5 907 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 ATP6V1G3Q96LB4 118 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 RNF123Q5XPI4 1314 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 TOMM70O94826 608 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 CYP21A2P08686 494 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 RALAP11233 206 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 C4BPBP20851 252 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 PGM1P36871 562 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 PSMD7P51665 324 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 ORC2Q13416 577 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 STAT4Q14765 748 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 SLC9A5Q14940 896 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 PRUNE1Q86TP1 453 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 OR6P1Q8NGX9 317 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 TSPAN17Q96FV3 270 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 TAF1DQ9H5J8 278 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 ABHD10Q9NUJ1 306 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 CLCA2Q9UQC9 943 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 RAPGEF6Q8TEU7 1601 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 DENND3A2RUS2 1198 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 KRT75O95678 551 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 EIF2AK2P19525 551 aaKnown RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 ADORA1P30542 326 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 HSPA9P38646 679 aaKnown RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 LIFRP42702 1097 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 DYNLL1P63167 89 aaKnown RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 PKP1Q13835 747 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 C16orf72Q14CZ0 275 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 USPL1Q5W0Q7 1092 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 C16orf89Q6UX73 402 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 SYDE1Q6ZW31 735 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 EEPD1Q7L9B9 569 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 CDR2LQ86X02 465 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 FOXP4Q8IVH2 680 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 C11orf70Q9BRQ4 267 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 TRIM8Q9BZR9 551 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 CCDC134Q9H6E4 229 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 TBC1D22BQ9NU19 505 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 ADAM21Q9UKJ8 722 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 PAIP2BQ9ULR5 123 aaKnown RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 MYOM2P54296 1465 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 HIST1H2AGP0C0S8 130 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 HIST1H2ADP20671 130 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 NFX1Q12986 1120 aaKnown RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 CYTH1Q15438 398 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 ACCSLQ4AC99 568 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 ABCC10Q5T3U5 1492 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 HIST1H2AHQ96KK5 128 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 HIST1H2AJQ99878 128 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 H2AFJQ9BTM1 129 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 PSD3Q9NYI0 1048 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 LZTS1Q9Y250 596 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 PCDHB6Q9Y5E3 794 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 LRRIQ3A6PVS8 624 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 APOL1O14791 398 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 LZTS3O60299 673 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 TERF2Q15554 542 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 SYTL3Q4VX76 610 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 RESP18Q5W5W9 173 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 PPP1R18Q6NYC8 613 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 HDDC2Q7Z4H3 204 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 TNIP2Q8NFZ5 429 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 SLC9A2Q9UBY0 812 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 ADCY3O60266 1144 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 SRP72O76094 671 aaKnown RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 GUCY1A3Q02108 690 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 PTPN21Q16825 1174 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 ADCK5Q3MIX3 580 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 POTEAQ6S8J7 498 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 RNF25Q96BH1 459 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 SLC13A1Q9BZW2 595 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 TTC7AQ9ULT0 858 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-205ENST00000461221 SESN1Q9Y6P5 492 aa9.51□□□□□ -0.89
BRCA1-205ENST00000461221 hCG_2014768A0A024R1R8 64 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 PVALEFA0A1B0GWK0 134 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 MEFVO15553 781 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 SEC24DO94855 1032 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 GNA15P30679 374 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 KRT76Q01546 638 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 ZNF394Q53GI3 561 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 RABGAP1LQ5R372 815 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 CC2D1AQ6P1N0 951 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 HORMAD1Q86X24 394 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 PASD1Q8IV76 773 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 KCNK16Q96T55 309 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 SCN3BQ9NY72 215 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 APOA4P06727 396 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 KCNQ4P56696 695 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 RESTQ13127 1097 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 VEPH1Q14D04 833 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms