RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 TRAK2O60296 914 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 IDEP14735 1019 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 FOSL2P15408 326 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 GAP43P17677 238 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 ABCD1P33897 745 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 CLLU1OSQ5K130 101 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 ATF7IP2Q5U623 682 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 SPRED2Q7Z698 418 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 MRPL10Q7Z7H8 261 aaKnown RBP20.23■□□□□ 0.83
DDR1-241ENST00000460944 CDR2LQ86X02 465 aaPredicted RBP20.23■□□□□ 0.83
DDR1-241ENST00000460944 FAM178BQ8IXR5 827 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 TMEM192Q8IY95 271 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 CEP57L1Q8IYX8 460 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 SLC17A8Q8NDX2 589 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 TMEM161BQ8NDZ6 487 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 CLP1Q92989 425 aaKnown RBP20.23■□□□□ 0.83
DDR1-241ENST00000460944 PDZD7Q9H5P4 517 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 RSAD1Q9HA92 442 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 UBN1Q9NPG3 1134 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 RNF19AQ9NV58 838 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 IPPQ9Y573 584 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 CHD7Q9P2D1 2997 aa20.23■□□□□ 0.83
DDR1-241ENST00000460944 MAPTP10636 758 aaKnown RBP20.22■□□□□ 0.83
DDR1-241ENST00000460944 PFKFB1P16118 471 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 DCAF4L1Q3SXM0 396 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 TPRNQ4KMQ1 711 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 EPC2Q52LR7 807 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 HAUS6Q7Z4H7 955 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 URGCPQ8TCY9 931 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 CASD1Q96PB1 797 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 APOL6Q9BWW8 343 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 AAASQ9NRG9 546 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 KBTBD4Q9NVX7 518 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 SEL1LQ9UBV2 794 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 TNFSF13BQ9Y275 285 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 INPP5FQ9Y2H2 1132 aa20.22■□□□□ 0.83
DDR1-241ENST00000460944 COL4A4P53420 1690 aaPredicted RBP20.22■□□□□ 0.83
DDR1-241ENST00000460944 A0A1B0GVL5 298 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 A0A1W2PQ27 194 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 A0A1W2PQ64 194 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 A0A1W2PQD8 194 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 GOLGA6L4A6NEF3 574 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 TTLL13PA6NNM8 815 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 EDN1P05305 212 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 RB1P06400 928 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 BMPR1AP36894 532 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 NT5DC1Q5TFE4 455 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 TAS1R3Q7RTX0 852 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 SFR1Q86XK3 245 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 CCDC65Q8IXS2 484 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 SMG8Q8ND04 991 aaKnown RBP20.21■□□□□ 0.83
DDR1-241ENST00000460944 GDPD5Q8WTR4 605 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 STAMQ92783 540 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 DNAJC19Q96DA6 116 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 NXF3Q9H4D5 531 aaKnown RBP20.21■□□□□ 0.83
DDR1-241ENST00000460944 TYW1Q9NV66 732 aaKnown RBP20.21■□□□□ 0.83
DDR1-241ENST00000460944 USP20Q9Y2K6 914 aa20.21■□□□□ 0.83
DDR1-241ENST00000460944 EPOPA6NHQ4 379 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 GTPBP6O43824 516 aaPredicted RBP20.2■□□□□ 0.82
DDR1-241ENST00000460944 LAG3P18627 525 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 IGFBP4P22692 258 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 ASIC1P78348 528 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 CSPP1Q1MSJ5 1256 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 ZNF568Q3ZCX4 644 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 NOMO2Q5JPE7 1267 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 EEF1DP3Q658K8 133 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 AGMOQ6ZNB7 445 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 FSIP1Q8NA03 581 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 MRPS27Q92552 414 aaKnown RBP20.2■□□□□ 0.82
DDR1-241ENST00000460944 KCNN1Q92952 543 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 BICD1Q96G01 975 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 ACO2Q99798 780 aaKnown RBP20.2■□□□□ 0.82
DDR1-241ENST00000460944 TCHPQ9BT92 498 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 C11orf84Q9BUA3 381 aaPredicted RBP20.2■□□□□ 0.82
DDR1-241ENST00000460944 TARS2Q9BW92 718 aaKnown RBP20.2■□□□□ 0.82
DDR1-241ENST00000460944 PLVAPQ9BX97 442 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 TRIM9Q9C026 710 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 PANK4Q9NVE7 773 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 USP25Q9UHP3 1055 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 STXBP5LQ9Y2K9 1186 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 HES2Q9Y543 173 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 PCDHB12Q9Y5F1 795 aa20.2■□□□□ 0.82
DDR1-241ENST00000460944 MEIS3P2A8K0S8 358 aa20.19■□□□□ 0.82
DDR1-241ENST00000460944 C5orf67F2Z3F1 127 aa20.19■□□□□ 0.82
DDR1-241ENST00000460944 RFXAPO00287 272 aa20.19■□□□□ 0.82
DDR1-241ENST00000460944 OFD1O75665 1012 aa20.19■□□□□ 0.82
DDR1-241ENST00000460944 LINC00271P0C7V0 271 aa20.19■□□□□ 0.82
DDR1-241ENST00000460944 NMT1P30419 496 aaKnown RBP20.19■□□□□ 0.82
DDR1-241ENST00000460944 SYKP43405 635 aa20.19■□□□□ 0.82
DDR1-241ENST00000460944 RNASELQ05823 741 aaKnown RBP20.19■□□□□ 0.82
DDR1-241ENST00000460944 GPM6BQ13491 265 aa20.19■□□□□ 0.82
DDR1-241ENST00000460944 HERC4Q5GLZ8 1057 aaPredicted RBP20.19■□□□□ 0.82
DDR1-241ENST00000460944 MRPL44Q9H9J2 332 aaKnown RBP20.19■□□□□ 0.82
DDR1-241ENST00000460944 KANSL3Q9P2N6 904 aa20.19■□□□□ 0.82
DDR1-241ENST00000460944 PARP2Q9UGN5 583 aa20.19■□□□□ 0.82
DDR1-241ENST00000460944 HPSEQ9Y251 543 aa20.19■□□□□ 0.82
DDR1-241ENST00000460944 GIT1Q9Y2X7 761 aa20.19■□□□□ 0.82
DDR1-241ENST00000460944 TDRD15B5MCY1 1934 aaKnown RBP20.19■□□□□ 0.82
DDR1-241ENST00000460944 PRRC2BQ5JSZ5 2229 aaKnown RBP20.19■□□□□ 0.82
DDR1-241ENST00000460944 SLFN14P0C7P3 912 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms