RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 SYCE2Q6PIF2 218 aa3.88□□□□□ -1.79
SYPL1-203ENST00000460770 UNQ6494/PRO21346Q6UXR6 183 aa3.88□□□□□ -1.79
SYPL1-203ENST00000460770 PDZD4Q76G19 769 aaPredicted RBP3.88□□□□□ -1.79
SYPL1-203ENST00000460770 PRIMA1Q86XR5 153 aa3.88□□□□□ -1.79
SYPL1-203ENST00000460770 HOMER1Q86YM7 354 aa3.88□□□□□ -1.79
SYPL1-203ENST00000460770 AHI1Q8N157 1196 aa3.88□□□□□ -1.79
SYPL1-203ENST00000460770 SH3TC2Q8TF17 1288 aa3.88□□□□□ -1.79
SYPL1-203ENST00000460770 SREK1Q8WXA9 508 aaKnown RBP3.88□□□□□ -1.79
SYPL1-203ENST00000460770 ENKD1Q9H0I2 346 aa3.88□□□□□ -1.79
SYPL1-203ENST00000460770 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.88□□□□□ -1.79
SYPL1-203ENST00000460770 TMEM260Q9NX78 707 aa3.88□□□□□ -1.79
SYPL1-203ENST00000460770 TRPM5Q9NZQ8 1165 aa3.88□□□□□ -1.79
SYPL1-203ENST00000460770 USP18Q9UMW8 372 aa3.88□□□□□ -1.79
SYPL1-203ENST00000460770 GRID2IPA4D2P6 1211 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 PPP1R12AO14974 1030 aaPredicted RBP3.87□□□□□ -1.79
SYPL1-203ENST00000460770 KPNA6O60684 536 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 SEC24DO94855 1032 aaPredicted RBP3.87□□□□□ -1.79
SYPL1-203ENST00000460770 PFKMP08237 780 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 RBP3P10745 1247 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 SDSP20132 328 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 POU3F2P20265 443 aaPredicted RBP3.87□□□□□ -1.79
SYPL1-203ENST00000460770 LMO1P25800 156 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 BMPR1AP36894 532 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 PHC1P78364 1004 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 CD69Q07108 199 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 SQSTM1Q13501 440 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 GJC2Q5T442 439 aaPredicted RBP3.87□□□□□ -1.79
SYPL1-203ENST00000460770 FRMD7Q6ZUT3 714 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 ADGRG3Q86Y34 549 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 ARHGEF19Q8IW93 802 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 PPM1KQ8N3J5 372 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 ZNF610Q8N9Z0 462 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 PIK3C3Q8NEB9 887 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 SLC9A6Q92581 669 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 CAVIN3Q969G5 261 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 ZNF764Q96H86 408 aaPredicted RBP3.87□□□□□ -1.79
SYPL1-203ENST00000460770 COQ10AQ96MF6 247 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 SERHL2Q9H4I8 314 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 ZSWIM4Q9H7M6 989 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 SPON1Q9HCB6 807 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 AKIP1Q9NQ31 210 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 THG1LQ9NWX6 298 aaKnown RBP3.87□□□□□ -1.79
SYPL1-203ENST00000460770 NUMBLQ9Y6R0 609 aa3.87□□□□□ -1.79
SYPL1-203ENST00000460770 CENPVL1A0A0U1RR11 272 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 TMEM200CA6NKL6 621 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 PRAMEF4O60810 478 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 GASTP01350 101 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 LTA4HP09960 611 aaKnown RBP3.86□□□□□ -1.79
SYPL1-203ENST00000460770 HKR1P10072 659 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 NR4A1P22736 598 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 APOBEC3AP31941 199 aaPredicted RBP3.86□□□□□ -1.79
SYPL1-203ENST00000460770 GUCY1B3Q02153 619 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 PPARAQ07869 468 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 MGAT5Q09328 741 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 CREB3L3Q68CJ9 461 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 EFCAB12Q6NXP0 572 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 OLFML1Q6UWY5 402 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 GPR150Q8NGU9 434 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 OR2W6PQ8NHA6 318 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 ZFP28Q8NHY6 868 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 CPEB1Q9BZB8 566 aaKnown RBP3.86□□□□□ -1.79
SYPL1-203ENST00000460770 ADARB2Q9NS39 739 aaKnown RBP3.86□□□□□ -1.79
SYPL1-203ENST00000460770 POGKQ9P215 609 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 INSL6Q9Y581 213 aa3.86□□□□□ -1.79
SYPL1-203ENST00000460770 A0A1W2PR48 441 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 AHRRA9YTQ3 701 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 MASP2O00187 686 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 ELL2O00472 640 aaPredicted RBP3.85□□□□□ -1.79
SYPL1-203ENST00000460770 NDUFA10O95299 355 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 CLEC2LP0C7M8 214 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 ZEB1P37275 1124 aaPredicted RBP3.85□□□□□ -1.79
SYPL1-203ENST00000460770 APBA1Q02410 837 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 DSG1Q02413 1049 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 C19orf54Q5BKX5 351 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 ABHD17BQ5VST6 288 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 FAM180AQ6UWF9 173 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 Q6YL49 198 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 LRRTM3Q86VH5 581 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 CXorf67Q86X51 503 aaPredicted RBP3.85□□□□□ -1.79
SYPL1-203ENST00000460770 BEND2Q8NDZ0 799 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 OR10H5Q8NGA6 315 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 OR14C36Q8NHC7 312 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 CHTF18Q8WVB6 975 aa3.85□□□□□ -1.79
SYPL1-203ENST00000460770 ZNF496Q96IT1 587 aaPredicted RBP3.85□□□□□ -1.79
SYPL1-203ENST00000460770 LSM14BQ9BX40 385 aaKnown RBP3.85□□□□□ -1.79
SYPL1-203ENST00000460770 REXO4Q9GZR2 422 aaKnown RBP3.85□□□□□ -1.79
SYPL1-203ENST00000460770 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.85□□□□□ -1.79
SYPL1-203ENST00000460770 KIAA0355O15063 1070 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 NCR1O76036 304 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 CDK4P11802 303 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 DDX6P26196 483 aaKnown RBP eCLIP3.84□□□□□ -1.793e-7■■□□□ 11.7
SYPL1-203ENST00000460770 LSSP48449 732 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 IL2P60568 153 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 NHLH2Q02577 135 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 BEAN1Q3B7T3 259 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 SPDYE7PQ495Y7 208 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 TAF7LQ5H9L4 462 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 CNNM4Q6P4Q7 775 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 CCDC62Q6P9F0 684 aa3.84□□□□□ -1.79
SYPL1-203ENST00000460770 C16orf86Q6ZW13 317 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms