RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ZNF473Q8WTR7 871 aaKnown RBP16.58■□□□□ 0.25
LMNB1-203ENST00000460265 ZBTB10Q96DT7 871 aa16.58■□□□□ 0.25
LMNB1-203ENST00000460265 PPANQ9NQ55 473 aaKnown RBP16.58■□□□□ 0.25
LMNB1-203ENST00000460265 PTPN22Q9Y2R2 807 aa16.58■□□□□ 0.25
LMNB1-203ENST00000460265 TARSL2A2RTX5 802 aaKnown RBP16.58■□□□□ 0.24
LMNB1-203ENST00000460265 LSP1P33241 339 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 PSMC5P62195 406 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 ITGB3BPQ13352 177 aaPredicted RBP16.58■□□□□ 0.24
LMNB1-203ENST00000460265 RBBP5Q15291 538 aaKnown RBP16.58■□□□□ 0.24
LMNB1-203ENST00000460265 DLK2Q6UY11 383 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 CCDC26Q8TAB7 109 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 SLC30A5Q8TAD4 765 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 SLC20A1Q8WUM9 679 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 SYN2Q92777 582 aaPredicted RBP16.58■□□□□ 0.24
LMNB1-203ENST00000460265 MBOAT7Q96N66 472 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 STK33Q9BYT3 514 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 CELF4Q9BZC1 486 aaKnown RBP16.58■□□□□ 0.24
LMNB1-203ENST00000460265 PLCB1Q9NQ66 1216 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 EME2A4GXA9 379 aaPredicted RBP16.58■□□□□ 0.24
LMNB1-203ENST00000460265 RAD51CO43502 376 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 AP1G2O75843 785 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 RASSF9O75901 435 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 CALCAP01258 141 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 MARK3P27448 753 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 HOXA7P31268 230 aaPredicted RBP16.58■□□□□ 0.24
LMNB1-203ENST00000460265 METTL13Q8N6R0 699 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 THAP2Q9H0W7 228 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 HAUS2Q9NVX0 235 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 USTQ9Y2C2 406 aa16.58■□□□□ 0.24
LMNB1-203ENST00000460265 SLC16A3O15427 465 aaKnown RBP16.57■□□□□ 0.24
LMNB1-203ENST00000460265 SART1O43290 800 aaKnown RBP16.57■□□□□ 0.24
LMNB1-203ENST00000460265 BUB1BO60566 1050 aaPredicted RBP16.57■□□□□ 0.24
LMNB1-203ENST00000460265 VPS41P49754 854 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 GADL1Q6ZQY3 521 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 DPH6Q7L8W6 267 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 FAM83AQ86UY5 434 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 TAX1BP1Q86VP1 789 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 MICAL1Q8TDZ2 1067 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 WNK4Q96J92 1243 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 CCT8L2Q96SF2 557 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 EPN3Q9H201 632 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 TOPORSQ9NS56 1045 aaPredicted RBP16.57■□□□□ 0.24
LMNB1-203ENST00000460265 TAS2R14Q9NYV8 317 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 SH3BP1Q9Y3L3 701 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 RREB1Q92766 1687 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 STRN3Q13033 797 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 UGCGQ16739 394 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 TMEM143Q96AN5 459 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 THOC1Q96FV9 657 aaKnown RBP16.57■□□□□ 0.24
LMNB1-203ENST00000460265 AS3MTQ9HBK9 375 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 UTP11Q9Y3A2 253 aaKnown RBP16.57■□□□□ 0.24
LMNB1-203ENST00000460265 NOC2LQ9Y3T9 749 aaKnown RBP16.57■□□□□ 0.24
LMNB1-203ENST00000460265 PCDHA10Q9Y5I2 948 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 MYH4Q9Y623 1939 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 ITGA4P13612 1032 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 MRPS9P82933 396 aaKnown RBP16.57■□□□□ 0.24
LMNB1-203ENST00000460265 LPAR1Q92633 364 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 GLG1Q92896 1179 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 PSMD1Q99460 953 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 PDCD2LQ9BRP1 358 aa16.57■□□□□ 0.24
LMNB1-203ENST00000460265 TPX2Q9ULW0 747 aaKnown RBP16.57■□□□□ 0.24
LMNB1-203ENST00000460265 EIF3DO15371 548 aaKnown RBP eCLIP16.56■□□□□ 0.241e-6■■□□□ 13.3
LMNB1-203ENST00000460265 PLS3P13797 630 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 CCND2P30279 289 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 R3HDM1Q15032 1099 aaKnown RBP16.56■□□□□ 0.24
LMNB1-203ENST00000460265 SEZ6Q53EL9 994 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 USP37Q86T82 979 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 AGO4Q9HCK5 861 aaKnown RBP16.56■□□□□ 0.24
LMNB1-203ENST00000460265 ETAA1Q9NY74 926 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 SLX4Q8IY92 1834 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 F8VZ95 297 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 FAM153BP0C7A2 387 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 CNGA1P29973 690 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 CTNNA1P35221 906 aaKnown RBP16.56■□□□□ 0.24
LMNB1-203ENST00000460265 ACOT2P49753 483 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 GNPTABQ3T906 1256 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 FAM153CQ494X1 144 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 WDR44Q5JSH3 913 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 MMGT1Q8N4V1 131 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 TPCN2Q8NHX9 752 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 ATP6V0A1Q93050 837 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 ZNF653Q96CK0 615 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 RNPC3Q96LT9 517 aaKnown RBP16.56■□□□□ 0.24
LMNB1-203ENST00000460265 FAM153AQ9UHL3 310 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 PPP1R9AQ9ULJ8 1098 aa16.56■□□□□ 0.24
LMNB1-203ENST00000460265 DAPK3O43293 454 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 PPP3CAQ08209 521 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 ADCY2Q08462 1091 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 PGM5Q15124 567 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 C10orf76Q5T2E6 689 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 PHLDB3Q6NSJ2 640 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 NLRP14Q86W24 1093 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 CCDC105Q8IYK2 499 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 FUKQ8N0W3 1084 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 ZNF280CQ8ND82 737 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 OR2W6PQ8NHA6 318 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 DEPTORQ8TB45 409 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 BTBD6Q96KE9 485 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 NT5C1BQ96P26 610 aa16.55■□□□□ 0.24
LMNB1-203ENST00000460265 PJA2O43164 708 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms