RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 TOM1L1O75674 476 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 KRT7P08729 469 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 SERPINB6P35237 376 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 METTL23Q86XA0 190 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 RIN2Q8WYP3 895 aaPredicted RBP15.74■□□□□ 0.11
PTPRU-205ENST00000460170 FAM49AQ9H0Q0 323 aaPredicted RBP15.74■□□□□ 0.11
PTPRU-205ENST00000460170 JPH1Q9HDC5 661 aaPredicted RBP15.74■□□□□ 0.11
PTPRU-205ENST00000460170 UVRAGQ9P2Y5 699 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 DGAT1O75907 488 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 MMS22LQ6ZRQ5 1243 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 TLK1Q9UKI8 766 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 KRT14P02533 472 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 PSMC1P62191 440 aaKnown RBP15.73■□□□□ 0.11
PTPRU-205ENST00000460170 TXNRD3Q86VQ6 643 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 CHMP6Q96FZ7 201 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 RIT2Q99578 217 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 CPSF2Q9P2I0 782 aaKnown RBP15.73■□□□□ 0.11
PTPRU-205ENST00000460170 DCTN3O75935 186 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 PLEKP08567 350 aaPredicted RBP15.73■□□□□ 0.11
PTPRU-205ENST00000460170 FIGNQ5HY92 759 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 SH2D3CQ8N5H7 860 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 SYT2Q8N9I0 419 aaPredicted RBP15.73■□□□□ 0.11
PTPRU-205ENST00000460170 FAM205AQ6ZU69 1335 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 DCCP43146 1447 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 SH3BP5O60239 455 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 H2AFXP16104 143 aaPredicted RBP15.73■□□□□ 0.11
PTPRU-205ENST00000460170 CYP11B2P19099 503 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 AP3M2P53677 418 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 GPS1Q13098 491 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 ATG16L1Q676U5 607 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 RHPN2Q8IUC4 686 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 FAM151AQ8WW52 585 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 MYCBPQ99417 103 aaPredicted RBP15.73■□□□□ 0.11
PTPRU-205ENST00000460170 DDX23Q9BUQ8 820 aaKnown RBP15.73■□□□□ 0.11
PTPRU-205ENST00000460170 MLXIPLQ9NP71 852 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 PCSK1NQ9UHG2 260 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.73■□□□□ 0.11
PTPRU-205ENST00000460170 ESRRAP11474 423 aaPredicted RBP15.73■□□□□ 0.11
PTPRU-205ENST00000460170 DUOXA2Q1HG44 320 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 LMBRD2Q68DH5 695 aaPredicted RBP15.73■□□□□ 0.11
PTPRU-205ENST00000460170 DEPDC1BQ8WUY9 529 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 FAM217BQ9NTX9 383 aaPredicted RBP15.73■□□□□ 0.11
PTPRU-205ENST00000460170 PNMA3Q9UL41 463 aa15.73■□□□□ 0.11
PTPRU-205ENST00000460170 GOLGA8MH3BSY2 632 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 KIAA0391O15091 583 aaKnown RBP15.72■□□□□ 0.11
PTPRU-205ENST00000460170 OATP04181 439 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 SLC1A1P43005 524 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 APOBEC3FQ8IUX4 373 aaKnown RBP15.72■□□□□ 0.11
PTPRU-205ENST00000460170 POLR3CQ9BUI4 534 aaPredicted RBP15.72■□□□□ 0.11
PTPRU-205ENST00000460170 PFDN6O15212 129 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 TMEM253P0C7T8 217 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 KRT17Q04695 432 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 BYSLQ13895 437 aaKnown RBP15.72■□□□□ 0.11
PTPRU-205ENST00000460170 SNRNP35Q16560 246 aaKnown RBP15.72■□□□□ 0.11
PTPRU-205ENST00000460170 KLHL38Q2WGJ6 581 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 PARVAQ9NVD7 372 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 ZNRF3Q9ULT6 936 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 COPEO14579 308 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 BAATQ14032 418 aaPredicted RBP15.72■□□□□ 0.11
PTPRU-205ENST00000460170 MAP7Q14244 749 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 DBN1Q16643 649 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 IZUMO3Q5VZ72 239 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 TTC17Q96AE7 1141 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 THOC1Q96FV9 657 aaKnown RBP15.72■□□□□ 0.11
PTPRU-205ENST00000460170 TRIM55Q9BYV6 548 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 GCKP35557 465 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 SARSP49591 514 aaKnown RBP15.72■□□□□ 0.11
PTPRU-205ENST00000460170 MMEL1Q495T6 779 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 XKR3Q5GH77 459 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 TRAPPC11Q7Z392 1133 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 TRIM51Q9BSJ1 452 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 Q9H521 79 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 ZNF70Q9UC06 446 aaPredicted RBP15.72■□□□□ 0.11
PTPRU-205ENST00000460170 HEY1Q9Y5J3 304 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 MST1RQ04912 1400 aa15.72■□□□□ 0.11
PTPRU-205ENST00000460170 RAD51CO43502 376 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 MDH1P40925 334 aaKnown RBP15.71■□□□□ 0.11
PTPRU-205ENST00000460170 CARSP49589 748 aaKnown RBP15.71■□□□□ 0.11
PTPRU-205ENST00000460170 HMGCS2P54868 508 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 MTMR2Q13614 643 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 SH2D4BQ5SQS7 431 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 USP38Q8NB14 1042 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 ATL2Q8NHH9 583 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 FBXO41Q8TF61 875 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 HVCN1Q96D96 273 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 SLC10A4Q96EP9 437 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 TOPORSQ9NS56 1045 aaPredicted RBP15.71■□□□□ 0.11
PTPRU-205ENST00000460170 DDX56Q9NY93 547 aaKnown RBP15.71■□□□□ 0.11
PTPRU-205ENST00000460170 MAGED2Q9UNF1 606 aaPredicted RBP15.71■□□□□ 0.11
PTPRU-205ENST00000460170 SHPRHQ149N8 1683 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 OPHN1O60890 802 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 NT5DC1Q5TFE4 455 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 CENPPQ6IPU0 288 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 LRIG3Q6UXM1 1119 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 GSDMBQ8TAX9 411 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 MAML1Q92585 1016 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 MXRA8Q9BRK3 442 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 KRT38O76015 456 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 EFNA5P52803 228 aa15.71■□□□□ 0.11
PTPRU-205ENST00000460170 E2F4Q16254 413 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms