RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 NFIAQ12857 509 aa12.75□□□□□ -0.37
SYNE2-207ENST00000458046 QRICH1Q2TAL8 776 aa12.75□□□□□ -0.37
SYNE2-207ENST00000458046 KCTD16Q68DU8 428 aa12.75□□□□□ -0.37
SYNE2-207ENST00000458046 OTUD6AQ7L8S5 288 aa12.75□□□□□ -0.37
SYNE2-207ENST00000458046 AGAP3Q96P47 875 aa12.75□□□□□ -0.37
SYNE2-207ENST00000458046 RUFY1Q96T51 708 aa12.75□□□□□ -0.37
SYNE2-207ENST00000458046 NUCKS1Q9H1E3 243 aaKnown RBP12.75□□□□□ -0.37
SYNE2-207ENST00000458046 GOLPH3Q9H4A6 298 aa12.75□□□□□ -0.37
SYNE2-207ENST00000458046 SMYD2Q9NRG4 433 aa12.75□□□□□ -0.37
SYNE2-207ENST00000458046 PLIN4Q96Q06 1357 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 NHSQ6T4R5 1651 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 C21orf2O43822 256 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 HSF2BPO75031 334 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 HEXIM1O94992 359 aaKnown RBP12.74□□□□□ -0.37
SYNE2-207ENST00000458046 GCFC2P16383 781 aaKnown RBP12.74□□□□□ -0.37
SYNE2-207ENST00000458046 NR2F2P24468 414 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 GUCY2FP51841 1108 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 CACNB3P54284 484 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 PABPC4Q13310 644 aaKnown RBP eCLIP12.74□□□□□ -0.37
SYNE2-207ENST00000458046 ASIC2Q16515 512 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 GPATCH4Q5T3I0 446 aaKnown RBP12.74□□□□□ -0.37
SYNE2-207ENST00000458046 EMBQ6PCB8 327 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 SYN2Q92777 582 aaPredicted RBP12.74□□□□□ -0.37
SYNE2-207ENST00000458046 CAPS2Q9BXY5 557 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 BCAS3Q9H6U6 928 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 NEUROD4Q9HD90 331 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 ZNF831Q5JPB2 1677 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 KDM3AQ9Y4C1 1321 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 CETN3O15182 167 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 GNA14O95837 355 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 KRT14P02533 472 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 TCP10Q12799 353 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 GRM1Q13255 1194 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 PRR16Q569H4 304 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 TTMPQ5BVD1 217 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 CDC42EP5Q6NZY7 148 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 IFT20Q8IY31 132 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 ZIM3Q96PE6 472 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 LUC7LQ9NQ29 371 aaKnown RBP12.74□□□□□ -0.37
SYNE2-207ENST00000458046 SEPT3Q9UH03 358 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 EGFL7Q9UHF1 273 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 PPP1R9AQ9ULJ8 1098 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 PCDHB8Q9UN66 801 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 PCDHB13Q9Y5F0 798 aa12.74□□□□□ -0.37
SYNE2-207ENST00000458046 DNMT3AQ9Y6K1 912 aaPredicted RBP12.74□□□□□ -0.37
SYNE2-207ENST00000458046 CDK5RAP2Q96SN8 1893 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 OPA1O60313 960 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 TAL1P17542 331 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-207ENST00000458046 CCT5P48643 541 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 DAB2P98082 770 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 PTK2Q05397 1052 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 PLBD1Q6P4A8 553 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 CATSPER3Q86XQ3 398 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 KLHL7Q8IXQ5 586 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 SH2D3CQ8N5H7 860 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 CCDC43Q96MW1 224 aaKnown RBP12.73□□□□□ -0.37
SYNE2-207ENST00000458046 P2RX7Q99572 595 aaKnown RBP12.73□□□□□ -0.37
SYNE2-207ENST00000458046 AP1M1Q9BXS5 423 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 ANO3Q9BYT9 981 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 CDV3Q9UKY7 258 aaKnown RBP12.73□□□□□ -0.37
SYNE2-207ENST00000458046 GOLGA8KD6RF30 607 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 SHOX2O60902 331 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-207ENST00000458046 KATNA1O75449 491 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 SLC12A3P55017 1021 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 GNGT1P63211 74 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 PPFIA1Q13136 1202 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 MEI1Q5TIA1 1274 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 FOXR2Q6PJQ5 311 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 GABPB2Q8TAK5 448 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-207ENST00000458046 SH3GL2Q99962 352 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 ZC3H12CQ9C0D7 883 aaKnown RBP12.73□□□□□ -0.37
SYNE2-207ENST00000458046 GANQ9H2C0 597 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 KCNMB3Q9NPA1 279 aa12.73□□□□□ -0.37
SYNE2-207ENST00000458046 CHCHD3Q9NX63 227 aaKnown RBP12.73□□□□□ -0.37
SYNE2-207ENST00000458046 FAM170AA1A519 330 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 GRID2IPA4D2P6 1211 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 RPL17P18621 184 aaKnown RBP12.72□□□□□ -0.37
SYNE2-207ENST00000458046 NOP2P46087 812 aaKnown RBP12.72□□□□□ -0.37
SYNE2-207ENST00000458046 RENBPP51606 427 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 MMS22LQ6ZRQ5 1243 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 NKAIN3Q8N8D7 197 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 BCAS4Q8TDM0 211 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 CAVIN3Q969G5 261 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 AIPL1Q9NZN9 384 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 PCDHAC2Q9Y5I4 1007 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 BTAF1O14981 1849 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 KCNK3O14649 394 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 HLA-DOAP06340 250 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 MYBP10242 640 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 EEF2P13639 858 aaKnown RBP12.72□□□□□ -0.37
SYNE2-207ENST00000458046 ATP1A2P50993 1020 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 LBX1P52954 281 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 CYP4A11Q02928 519 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 GIT2Q14161 759 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 C21orf62-AS1Q17RA5 79 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 USH1GQ495M9 461 aa12.72□□□□□ -0.37
SYNE2-207ENST00000458046 GLE1Q53GS7 698 aaKnown RBP12.72□□□□□ -0.37
SYNE2-207ENST00000458046 DCAF17Q5H9S7 520 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-207ENST00000458046 TCERG1LQ5VWI1 586 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms