RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 ICAM1P05362 532 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 PGK2P07205 417 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 TRIM49P0CI25 452 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 TRIM49CP0CI26 452 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 PMS2P54278 862 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 ARHGEF2Q92974 986 aaKnown RBP17.5■□□□□ 0.39
LSS-205ENST00000457828 SFNP31947 248 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 MYO1EQ12965 1108 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 DRAP1Q14919 205 aaPredicted RBP17.5■□□□□ 0.39
LSS-205ENST00000457828 CATSPER4Q7RTX7 472 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 C7orf31Q8N865 590 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 LXNQ9BS40 222 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 UBXN6Q9BZV1 441 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 ISCUQ9H1K1 167 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 SLC40A1Q9NP59 571 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 KCNH4Q9UQ05 1017 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 NUB1Q9Y5A7 615 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 PDHXO00330 501 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 IFNB1P01574 187 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 PDIA5Q14554 519 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 CHADLQ6NUI6 762 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 GJB7Q6PEY0 223 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 ZBTB33Q86T24 672 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 ZNF653Q96CK0 615 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 GMCL1Q96IK5 515 aa17.5■□□□□ 0.39
LSS-205ENST00000457828 CYTH3O43739 400 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 HIP1RO75146 1068 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 TNNC2P02585 160 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 GCLCP48506 637 aaPredicted RBP17.49■□□□□ 0.39
LSS-205ENST00000457828 GALCP54803 685 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 OR6J1Q8NGC5 347 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 RUNDC3BQ96NL0 473 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 IQCGQ9H095 443 aaKnown RBP17.49■□□□□ 0.39
LSS-205ENST00000457828 VPS37BQ9H9H4 285 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 KCPQ6ZWJ8 1503 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 STRCQ7RTU9 1775 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 PTPRAP18433 802 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 SMARCA1P28370 1054 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 CAVIN3Q969G5 261 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 CYP2C8P10632 490 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 MIIPQ5JXC2 388 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 HHATQ5VTY9 493 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 ACCSQ96QU6 501 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 SLITRK6Q9H5Y7 841 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 PHRF1Q9P1Y6 1649 aaKnown RBP17.49■□□□□ 0.39
LSS-205ENST00000457828 IRF6O14896 467 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 ZNF263O14978 683 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 GNAT1P11488 350 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 FGFR4P22455 802 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 MXRA7P84157 204 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 SGO2Q562F6 1265 aa17.49■□□□□ 0.39
LSS-205ENST00000457828 PFASO15067 1338 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 EIF4E1BA6NMX2 242 aaKnown RBP17.48■□□□□ 0.39
LSS-205ENST00000457828 CSPG5O95196 566 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 STAT5BP51692 787 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 EP400NLQ6ZTU2 488 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 ZNF354CQ86Y25 554 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 TAB3Q8N5C8 712 aaPredicted RBP17.48■□□□□ 0.39
LSS-205ENST00000457828 MCPH1Q8NEM0 835 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 TNFRSF25Q93038 417 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 ECEL1O95672 775 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 PSMC5P62195 406 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 C6orf118Q5T5N4 469 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 P2RX7Q99572 595 aaKnown RBP17.48■□□□□ 0.39
LSS-205ENST00000457828 POC1B-GALNT4F8VUJ3 575 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 TRPA1O75762 1119 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 TAL1P17542 331 aaPredicted RBP17.48■□□□□ 0.39
LSS-205ENST00000457828 SESN3P58005 492 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 SMC1BQ8NDV3 1235 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 EIF2AK1Q9BQI3 630 aaKnown RBP17.48■□□□□ 0.39
LSS-205ENST00000457828 LRFN2Q9ULH4 789 aa17.48■□□□□ 0.39
LSS-205ENST00000457828 CHN1P15882 459 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 ZC3H15Q8WU90 426 aaKnown RBP17.47■□□□□ 0.39
LSS-205ENST00000457828 NAGPAQ9UK23 515 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 ATF2P15336 505 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 FCGRTP55899 365 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 PPATQ06203 517 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 TRADDQ15628 312 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 KCNV1Q6PIU1 500 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 FAM47EQ6ZV65 393 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 SCFD2Q8WU76 684 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 PSPC1Q8WXF1 523 aaKnown RBP17.47■□□□□ 0.39
LSS-205ENST00000457828 NMRK2Q9NPI5 230 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 ZNF233A6NK53 670 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 AGPSO00116 658 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 ADAMTS3O15072 1205 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 GBP1P32455 592 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 ADCY2Q08462 1091 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 DAGLBQ8NCG7 672 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 SLC17A8Q8NDX2 589 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 ATP6V0A4Q9HBG4 840 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 SLC24A3Q9HC58 644 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 CHORDC1Q9UHD1 332 aaPredicted RBP17.47■□□□□ 0.39
LSS-205ENST00000457828 SIK3Q9Y2K2 1263 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 RGPD5Q99666 1765 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 MANSC4A6NHS7 340 aaPredicted RBP17.47■□□□□ 0.39
LSS-205ENST00000457828 NFIBO00712 420 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 ITGA4P13612 1032 aa17.47■□□□□ 0.39
LSS-205ENST00000457828 RNASELQ05823 741 aaKnown RBP17.47■□□□□ 0.39
LSS-205ENST00000457828 THNSL1Q8IYQ7 743 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms