RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 EXOC7Q9UPT5 735 aa19.61■□□□□ 0.73
FAM239A-203ENST00000456563 A0A0U1RQF3 1178 aa19.6■□□□□ 0.73
FAM239A-203ENST00000456563 ZBBXA8MT70 800 aa19.6■□□□□ 0.73
FAM239A-203ENST00000456563 PRPF6O94906 941 aaKnown RBP19.6■□□□□ 0.73
FAM239A-203ENST00000456563 KCNA1Q09470 495 aa19.6■□□□□ 0.73
FAM239A-203ENST00000456563 BMT2Q1RMZ1 405 aa19.6■□□□□ 0.73
FAM239A-203ENST00000456563 TMEM132AQ24JP5 1023 aa19.6■□□□□ 0.73
FAM239A-203ENST00000456563 SLC27A1Q6PCB7 646 aa19.6■□□□□ 0.73
FAM239A-203ENST00000456563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.6■□□□□ 0.73
FAM239A-203ENST00000456563 SCFD1Q8WVM8 642 aa19.6■□□□□ 0.73
FAM239A-203ENST00000456563 TMEM206Q9H813 350 aa19.6■□□□□ 0.73
FAM239A-203ENST00000456563 CXXC1Q9P0U4 656 aaPredicted RBP19.6■□□□□ 0.73
FAM239A-203ENST00000456563 MAN1B1Q9UKM7 699 aa19.6■□□□□ 0.73
FAM239A-203ENST00000456563 ABLIM1O14639 778 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 ZNF623O75123 536 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 TOM1L1O75674 476 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 AMHP03971 560 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 SKIP12755 728 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 PROZP22891 400 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 KCNJ6P48051 423 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 RAB27AP51159 221 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 ZNF658Q5TYW1 1059 aaPredicted RBP19.59■□□□□ 0.73
FAM239A-203ENST00000456563 PRPF38BQ5VTL8 546 aaKnown RBP19.59■□□□□ 0.73
FAM239A-203ENST00000456563 EEF1DP3Q658K8 133 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 CHRDL2Q6WN34 429 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 BICD1Q96G01 975 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 RNPC3Q96LT9 517 aaKnown RBP19.59■□□□□ 0.73
FAM239A-203ENST00000456563 ADPGKQ9BRR6 497 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 ELAC1Q9H777 363 aaKnown RBP19.59■□□□□ 0.73
FAM239A-203ENST00000456563 FAM105AQ9NUU6 356 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
FAM239A-203ENST00000456563 SLC4A7Q9Y6M7 1214 aa19.59■□□□□ 0.73
FAM239A-203ENST00000456563 HNRNPDLO14979 420 aaKnown RBP19.58■□□□□ 0.72
FAM239A-203ENST00000456563 HOXD13P35453 343 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 LIG4P49917 911 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 DEFB103AP81534 67 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 KLHL40Q2TBA0 621 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 COBLL1Q53SF7 1204 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 MPZL3Q6UWV2 235 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 APBB1IPQ7Z5R6 666 aaPredicted RBP19.58■□□□□ 0.72
FAM239A-203ENST00000456563 CDR2LQ86X02 465 aaPredicted RBP19.58■□□□□ 0.72
FAM239A-203ENST00000456563 ECHDC2Q86YB7 292 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 MYOCDQ8IZQ8 938 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 CRIPAKQ8N1N5 446 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 TRIML1Q8N9V2 468 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 PHOSPHO2Q8TCD6 241 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 TOP1MTQ969P6 601 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 SLC9A7Q96T83 725 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 EIF2AQ9BY44 585 aaKnown RBP19.58■□□□□ 0.72
FAM239A-203ENST00000456563 GDAQ9Y2T3 454 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 MICAL3Q7RTP6 2002 aa19.58■□□□□ 0.72
FAM239A-203ENST00000456563 ANKRD63C9JTQ0 380 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 KIF20AO95235 890 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 EOMESO95936 686 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 MORC3Q14149 939 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 DCAF4L1Q3SXM0 396 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 CCDC183Q5T5S1 534 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 SLC39A4Q6P5W5 647 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 RBM43Q6ZSC3 357 aaKnown RBP19.57■□□□□ 0.72
FAM239A-203ENST00000456563 MRPL10Q7Z7H8 261 aaKnown RBP19.57■□□□□ 0.72
FAM239A-203ENST00000456563 ZNF598Q86UK7 904 aaKnown RBP19.57■□□□□ 0.72
FAM239A-203ENST00000456563 NPAS4Q8IUM7 802 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 TDHQ8IZJ6 230 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 SYCP3Q8IZU3 236 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 GUF1Q8N442 669 aaKnown RBP19.57■□□□□ 0.72
FAM239A-203ENST00000456563 ZBTB45Q96K62 511 aaPredicted RBP19.57■□□□□ 0.72
FAM239A-203ENST00000456563 TMEM161AQ9NX61 479 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 PCDHB2Q9Y5E7 798 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 STYXL1Q9Y6J8 313 aa19.57■□□□□ 0.72
FAM239A-203ENST00000456563 CLDN3O15551 220 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 NPTXRO95502 500 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 STAG3L1P0CL83 205 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 MCF2P10911 925 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 ATF7P17544 494 aaPredicted RBP19.56■□□□□ 0.72
FAM239A-203ENST00000456563 MCL1Q07820 350 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 NFKBIBQ15653 356 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 KNOP1Q1ED39 458 aaKnown RBP19.56■□□□□ 0.72
FAM239A-203ENST00000456563 ZNF568Q3ZCX4 644 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 SLFN12LQ6IEE8 588 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 NELFCDQ8IXH7 590 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 SMG8Q8ND04 991 aaKnown RBP19.56■□□□□ 0.72
FAM239A-203ENST00000456563 TCHPQ9BT92 498 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 TRIM6Q9C030 488 aaPredicted RBP19.56■□□□□ 0.72
FAM239A-203ENST00000456563 GBP3Q9H0R5 595 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 CDT1Q9H211 546 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 IKZF4Q9H2S9 585 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 IPPQ9Y573 584 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 PCDHB7Q9Y5E2 793 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 ZMYM2Q9UBW7 1377 aa19.56■□□□□ 0.72
FAM239A-203ENST00000456563 A0A1W2PPC1 479 aa19.55■□□□□ 0.72
FAM239A-203ENST00000456563 CEP290O15078 2479 aa19.55■□□□□ 0.72
FAM239A-203ENST00000456563 ATP2A2P16615 1042 aaKnown RBP19.55■□□□□ 0.72
FAM239A-203ENST00000456563 BMP6P22004 513 aa19.55■□□□□ 0.72
FAM239A-203ENST00000456563 SNRPFP62306 86 aaKnown RBP19.55■□□□□ 0.72
FAM239A-203ENST00000456563 NOLC1Q14978 699 aaKnown RBP eCLIP19.55■□□□□ 0.72
FAM239A-203ENST00000456563 SKOR2Q2VWA4 1001 aaPredicted RBP19.55■□□□□ 0.72
FAM239A-203ENST00000456563 PGBD4Q96DM1 585 aa19.55■□□□□ 0.72
FAM239A-203ENST00000456563 HAPLN2Q9GZV7 340 aa19.55■□□□□ 0.72
FAM239A-203ENST00000456563 TMEM63CQ9P1W3 806 aa19.55■□□□□ 0.72
FAM239A-203ENST00000456563 ANKFY1Q9P2R3 1169 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms