RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 CUEDC2Q9H467 287 aa15.61■□□□□ 0.09
HDAC4-205ENST00000454542 NXF3Q9H4D5 531 aaKnown RBP15.61■□□□□ 0.09
HDAC4-205ENST00000454542 RSAD1Q9HA92 442 aa15.61■□□□□ 0.09
HDAC4-205ENST00000454542 PARVGQ9HBI0 331 aa15.61■□□□□ 0.09
HDAC4-205ENST00000454542 LARSQ9P2J5 1176 aaKnown RBP15.61■□□□□ 0.09
HDAC4-205ENST00000454542 KCNG1Q9UIX4 513 aa15.61■□□□□ 0.09
HDAC4-205ENST00000454542 CCDC169A6NNP5 214 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 SFI1A8K8P3 1242 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 LAG3P18627 525 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 SCP2P22307 547 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 PROZP22891 400 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 NUCB2P80303 420 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 GPM6BQ13491 265 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 EEF1DP3Q658K8 133 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 GLB1LQ6UWU2 654 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 CDR2LQ86X02 465 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-205ENST00000454542 ABI1Q8IZP0 508 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 COLGALT1Q8NBJ5 622 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 RNF169Q8NCN4 708 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 LMAN2LQ9H0V9 348 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 TNMDQ9H2S6 317 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 PTPRHQ9HD43 1115 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 TYW1Q9NV66 732 aaKnown RBP15.6■□□□□ 0.09
HDAC4-205ENST00000454542 TBC1D13Q9NVG8 400 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 KBTBD4Q9NVX7 518 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 TNFSF13BQ9Y275 285 aa15.6■□□□□ 0.09
HDAC4-205ENST00000454542 PRRC2BQ5JSZ5 2229 aaKnown RBP15.59■□□□□ 0.09
HDAC4-205ENST00000454542 TDRD15B5MCY1 1934 aaKnown RBP15.59■□□□□ 0.09
HDAC4-205ENST00000454542 FAM237AA0A1B0GTK4 181 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 MYMKA6NI61 221 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 H0YCG3 227 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 K7ERI5 159 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 SLC16A4O15374 487 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 FAM13AO94988 1023 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 NPTXRO95502 500 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 ME1P48163 572 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 DHX8Q14562 1220 aaKnown RBP15.59■□□□□ 0.09
HDAC4-205ENST00000454542 CSPP1Q1MSJ5 1256 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 DCAF4L1Q3SXM0 396 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 NOMO2Q5JPE7 1267 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 SV2BQ7L1I2 683 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 DDX12PQ92771 950 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 ACO2Q99798 780 aaKnown RBP15.59■□□□□ 0.09
HDAC4-205ENST00000454542 MRPL4Q9BYD3 311 aaKnown RBP15.59■□□□□ 0.09
HDAC4-205ENST00000454542 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 ST6GALNAC4Q9H4F1 302 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 MAGEF1Q9HAY2 307 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 UBN1Q9NPG3 1134 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 USP20Q9Y2K6 914 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 GIT1Q9Y2X7 761 aa15.59■□□□□ 0.09
HDAC4-205ENST00000454542 GTPBP6O43824 516 aaPredicted RBP15.58■□□□□ 0.08
HDAC4-205ENST00000454542 B4GALT3O60512 393 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 TBCAO75347 108 aaKnown RBP15.58■□□□□ 0.08
HDAC4-205ENST00000454542 PPP1R37O75864 691 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 PIGRP01833 764 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 ITGB1P05556 798 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 ITGA4P13612 1032 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 SMTNP53814 917 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 ATF7IP2Q5U623 682 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 CNNM4Q6P4Q7 775 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 HACE1Q8IYU2 909 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 PDILTQ8N807 584 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 GSTCDQ8NEC7 633 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 MRPL38Q96DV4 380 aaKnown RBP15.58■□□□□ 0.08
HDAC4-205ENST00000454542 SPATA32Q96LK8 384 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 TRIM6Q9C030 488 aaPredicted RBP15.58■□□□□ 0.08
HDAC4-205ENST00000454542 SCAND2PQ9GZW5 306 aaPredicted RBP15.58■□□□□ 0.08
HDAC4-205ENST00000454542 CDT1Q9H211 546 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 AAASQ9NRG9 546 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 SEL1LQ9UBV2 794 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 HPSEQ9Y251 543 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 HES2Q9Y543 173 aa15.58■□□□□ 0.08
HDAC4-205ENST00000454542 PDCD11Q14690 1871 aaKnown RBP15.57■□□□□ 0.08
HDAC4-205ENST00000454542 CARNS1A5YM72 827 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 GRM6O15303 877 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 TRAK2O60296 914 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 KRT18P05783 430 aaKnown RBP15.57■□□□□ 0.08
HDAC4-205ENST00000454542 IGFBP4P22692 258 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 PPM1AP35813 382 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 AFF1P51825 1210 aaKnown RBP15.57■□□□□ 0.08
HDAC4-205ENST00000454542 PLCB3Q01970 1234 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 UBE3AQ05086 875 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 CAMK1Q14012 370 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 LONRF3Q496Y0 759 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 TIGD5Q53EQ6 642 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 ADALQ6DHV7 355 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 ZPBP2Q6X784 338 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 HAUS6Q7Z4H7 955 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 MAP4K3Q8IVH8 894 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 SLC39A11Q8N1S5 342 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 KLHL23Q8NBE8 558 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 SLC17A8Q8NDX2 589 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 SPPL3Q8TCT6 385 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 ZNF558Q96NG5 402 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 ADPGKQ9BRR6 497 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 TARS2Q9BW92 718 aaKnown RBP15.57■□□□□ 0.08
HDAC4-205ENST00000454542 STRA6Q9BX79 667 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 NRDE2Q9H7Z3 1164 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 OLFML3Q9NRN5 406 aa15.57■□□□□ 0.08
HDAC4-205ENST00000454542 CIZ1Q9ULV3 898 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms