RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 SPIRE1Q08AE8 756 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 TMC5Q6UXY8 1006 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 STAMQ92783 540 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 DYDC2Q96IM9 177 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 RPS6KC1Q96S38 1066 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 PHOX2BQ99453 314 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 HERC2P3Q9BVR0 1158 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 CSRNP2Q9H175 543 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 RGL1Q9NZL6 768 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 ORC3Q9UBD5 711 aaPredicted RBP12.95□□□□□ -0.34
COPS7B-213ENST00000449174 LIMD1Q9UGP4 676 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 TPCN1Q9ULQ1 816 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 PCDHA12Q9UN75 941 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 IPPQ9Y573 584 aa12.95□□□□□ -0.34
COPS7B-213ENST00000449174 ARL5CA6NH57 179 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 B4GALT3O60512 393 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 EIF5BO60841 1220 aaKnown RBP12.94□□□□□ -0.34
COPS7B-213ENST00000449174 SLITRK3O94933 977 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 GLUD2P49448 558 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 CLCN5P51795 746 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 CYP4A11Q02928 519 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 DSC1Q08554 894 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 CTTNQ14247 550 aaKnown RBP12.94□□□□□ -0.34
COPS7B-213ENST00000449174 ASTLQ6HA08 431 aaPredicted RBP12.94□□□□□ -0.34
COPS7B-213ENST00000449174 TPH2Q8IWU9 490 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 COLGALT2Q8IYK4 626 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 RNF168Q8IYW5 571 aaPredicted RBP12.94□□□□□ -0.34
COPS7B-213ENST00000449174 SMG8Q8ND04 991 aaKnown RBP12.94□□□□□ -0.34
COPS7B-213ENST00000449174 OXER1Q8TDS5 423 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 HDAC7Q8WUI4 952 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 CCDC43Q96MW1 224 aaKnown RBP12.94□□□□□ -0.34
COPS7B-213ENST00000449174 HSD17B14Q9BPX1 270 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 TRIM6Q9C030 488 aaPredicted RBP12.94□□□□□ -0.34
COPS7B-213ENST00000449174 MFSD1Q9H3U5 465 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 IGSF9Q9P2J2 1179 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 GIT1Q9Y2X7 761 aa12.94□□□□□ -0.34
COPS7B-213ENST00000449174 PROB1E7EW31 1015 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 INO80B-WBP1J3KQ70 363 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 EFEMP2O95967 443 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 GLUD1P00367 558 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 PDGFBP01127 241 aaPredicted RBP12.93□□□□□ -0.34
COPS7B-213ENST00000449174 SSBP05455 408 aaKnown RBP eCLIP12.93□□□□□ -0.34
COPS7B-213ENST00000449174 ASGR2P07307 311 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 XRCC6P12956 609 aaKnown RBP eCLIP12.93□□□□□ -0.34
COPS7B-213ENST00000449174 MLH1P40692 756 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 OR1G1P47890 313 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 AFF1P51825 1210 aaKnown RBP12.93□□□□□ -0.34
COPS7B-213ENST00000449174 CREMQ03060 361 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 MBTD1Q05BQ5 628 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 TDGQ13569 410 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 CALCRLQ16602 461 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 TNFRSF25Q93038 417 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 EIF2AK1Q9BQI3 630 aaKnown RBP12.93□□□□□ -0.34
COPS7B-213ENST00000449174 COLEC11Q9BWP8 271 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 RXFP1Q9HBX9 757 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 XPNPEP1Q9NQW7 623 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 MAN1C1Q9NR34 630 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.93□□□□□ -0.34
COPS7B-213ENST00000449174 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
COPS7B-213ENST00000449174 MARCH5Q9NX47 278 aa12.93□□□□□ -0.34
COPS7B-213ENST00000449174 NEMFO60524 1076 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 GFRA3O60609 400 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 PAPLNO95428 1278 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 CTDNEP1O95476 244 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 ARL2P36404 184 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 RARRES1P49788 294 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 AK2P54819 239 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 DSG1Q02413 1049 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 CAPSQ13938 189 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 TRIM29Q14134 588 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 EARS2Q5JPH6 523 aaKnown RBP12.92□□□□□ -0.34
COPS7B-213ENST00000449174 KIAA0319Q5VV43 1072 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 KANK3Q6NY19 840 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 SLC27A1Q6PCB7 646 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 TMEM105Q8N8V8 129 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 NXPE3Q969Y0 559 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 PRIMPOLQ96LW4 560 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 GAD1Q99259 594 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 EIF2AQ9BY44 585 aaKnown RBP12.92□□□□□ -0.34
COPS7B-213ENST00000449174 PLEKHA4Q9H4M7 779 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 TTC12Q9H892 705 aaPredicted RBP12.92□□□□□ -0.34
COPS7B-213ENST00000449174 CHST7Q9NS84 486 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 GJB4Q9NTQ9 266 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 DUSP12Q9UNI6 340 aa12.92□□□□□ -0.34
COPS7B-213ENST00000449174 PRG3Q9Y2Y8 225 aaPredicted RBP12.92□□□□□ -0.34
COPS7B-213ENST00000449174 H0Y858 1186 aa12.91□□□□□ -0.34
COPS7B-213ENST00000449174 C2CD2LO14523 706 aa12.91□□□□□ -0.34
COPS7B-213ENST00000449174 TEX28O15482 410 aa12.91□□□□□ -0.34
COPS7B-213ENST00000449174 ARF4P18085 180 aaPredicted RBP12.91□□□□□ -0.34
COPS7B-213ENST00000449174 NBL1P41271 181 aa12.91□□□□□ -0.34
COPS7B-213ENST00000449174 GRIK3Q13003 919 aa12.91□□□□□ -0.34
COPS7B-213ENST00000449174 NR5A1Q13285 461 aa12.91□□□□□ -0.34
COPS7B-213ENST00000449174 ASAP3Q8TDY4 903 aa12.91□□□□□ -0.34
COPS7B-213ENST00000449174 GTF3C6Q969F1 213 aa12.91□□□□□ -0.34
COPS7B-213ENST00000449174 CPB2Q96IY4 423 aa12.91□□□□□ -0.34
COPS7B-213ENST00000449174 KCNK12Q9HB15 430 aa12.91□□□□□ -0.34
COPS7B-213ENST00000449174 WDR6Q9NNW5 1121 aaKnown RBP12.91□□□□□ -0.34
COPS7B-213ENST00000449174 FAM86C1Q9NVL1 165 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms