RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 GRM4Q14833 912 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 RPS6KA1Q15418 735 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 SLC18A3Q16572 532 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 PTPN21Q16825 1174 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 ODF2Q5BJF6 829 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 SPDYAQ5MJ70 313 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 SFMBT2Q5VUG0 894 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 RASGEF1CQ8N431 466 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 KCTD17Q8N5Z5 321 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 HDAC7Q8WUI4 952 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 NUP133Q8WUM0 1156 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 VTI1AQ96AJ9 217 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 GRAMD1AQ96CP6 724 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 TLCD1Q96CP7 247 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 SAAL1Q96ER3 474 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 RRP36Q96EU6 259 aaKnown RBP8.22□□□□□ -1.09
TRIM4-204ENST00000447480 FAXDC2Q96IV6 333 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 CLMNQ96JQ2 1002 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 CFHR5Q9BXR6 569 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 OSBPL7Q9BZF2 842 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 RAB34Q9BZG1 259 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 UNC93B1Q9H1C4 597 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 SENP2Q9HC62 589 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 IL17RBQ9NRM6 502 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 RBM12Q9NTZ6 932 aaKnown RBP8.22□□□□□ -1.09
TRIM4-204ENST00000447480 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.22□□□□□ -1.09
TRIM4-204ENST00000447480 SLC5A4Q9NY91 659 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 VPS54Q9P1Q0 977 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 TPX2Q9ULW0 747 aaKnown RBP8.22□□□□□ -1.09
TRIM4-204ENST00000447480 NFU1Q9UMS0 254 aa8.22□□□□□ -1.09
TRIM4-204ENST00000447480 KLHL33A6NCF5 533 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 PPFIA2O75334 1257 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 ATP6V1G2O95670 118 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 AGTP01019 485 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 KRT14P02533 472 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 PDHBP11177 359 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 DRD4P21917 467 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 ATP5DP30049 168 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 CTNNA1P35221 906 aaKnown RBP8.21□□□□□ -1.1
TRIM4-204ENST00000447480 HSD17B3P37058 310 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 SH3BGRP55822 239 aaPredicted RBP8.21□□□□□ -1.1
TRIM4-204ENST00000447480 RWDD2BP57060 319 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 ELF3P78545 371 aaPredicted RBP8.21□□□□□ -1.1
TRIM4-204ENST00000447480 GUCY1A3Q02108 690 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 RBBP5Q15291 538 aaKnown RBP8.21□□□□□ -1.1
TRIM4-204ENST00000447480 TAF1CQ15572 869 aaPredicted RBP8.21□□□□□ -1.1
TRIM4-204ENST00000447480 NAALADL2Q58DX5 795 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 ANKRD40Q6AI12 368 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 CATSPERGQ6ZRH7 1159 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 UNC13DQ70J99 1090 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 KRT25Q7Z3Z0 450 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 VPS36Q86VN1 386 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 MCF2L2Q86YR7 1114 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 SMYD4Q8IYR2 804 aaPredicted RBP8.21□□□□□ -1.1
TRIM4-204ENST00000447480 CCDC63Q8NA47 563 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 BAP1Q92560 729 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 HVCN1Q96D96 273 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 CALML4Q96GE6 196 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 GDAP1L1Q96MZ0 367 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 XPO6Q96QU8 1125 aaKnown RBP8.21□□□□□ -1.1
TRIM4-204ENST00000447480 SPAG5Q96R06 1193 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 NAP1L4Q99733 375 aaKnown RBP8.21□□□□□ -1.1
TRIM4-204ENST00000447480 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.21□□□□□ -1.12e-6■■■■□ 19.8
TRIM4-204ENST00000447480 ZKSCAN3Q9BRR0 538 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 SPZ1Q9BXG8 430 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 TRIM9Q9C026 710 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 PLEKHA4Q9H4M7 779 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 RPAP3Q9H6T3 665 aaPredicted RBP8.21□□□□□ -1.1
TRIM4-204ENST00000447480 HAUS2Q9NVX0 235 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 MAP3K20Q9NYL2 800 aaKnown RBP8.21□□□□□ -1.1
TRIM4-204ENST00000447480 SAMD15Q9P1V8 674 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 MAP10Q9P2G4 905 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 SUCLA2Q9P2R7 463 aaPredicted RBP8.21□□□□□ -1.1
TRIM4-204ENST00000447480 PPP1R9AQ9ULJ8 1098 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 SLC12A4Q9UP95 1085 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 RABGAP1Q9Y3P9 1069 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 CAPN6Q9Y6Q1 641 aa8.21□□□□□ -1.1
TRIM4-204ENST00000447480 CCDC194A0A1B0GVG4 234 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 KLRF2D3W0D1 207 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 M0R2N6 131 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 PGRMC1O00264 195 aaKnown RBP8.2□□□□□ -1.1
TRIM4-204ENST00000447480 PDHXO00330 501 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 DNM1LO00429 736 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 WNT7AO00755 349 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 ATP2A1O14983 1001 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 MOCS3O95396 460 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 RXRAP19793 462 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 HOXD10P28358 340 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 GNA11P29992 359 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 SSR1P43307 286 aaKnown RBP8.2□□□□□ -1.1
TRIM4-204ENST00000447480 ATP1A2P50993 1020 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 PDE6CP51160 858 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 SARNPP82979 210 aaKnown RBP8.2□□□□□ -1.1
TRIM4-204ENST00000447480 FKBP3Q00688 224 aaKnown RBP8.2□□□□□ -1.1
TRIM4-204ENST00000447480 CYP27A1Q02318 531 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 ADCY2Q08462 1091 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 ZNF844Q08AG5 666 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 CCDC15Q0P6D6 951 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 GRM1Q13255 1194 aa8.2□□□□□ -1.1
TRIM4-204ENST00000447480 DHX34Q14147 1143 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms