RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 CASP4P49662 377 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 GALCP54803 685 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 IFT88Q13099 833 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 NFIL3Q16649 462 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 PRR16Q569H4 304 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 TCERG1LQ5VWI1 586 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 KCTD17Q8N5Z5 321 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 CHST13Q8NET6 341 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 U2AF1L4Q8WU68 220 aaKnown RBP12.37□□□□□ -0.43
GNE-203ENST00000447283 BRI3BPQ8WY22 251 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 LENG9Q96B70 501 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 FAM20AQ96MK3 541 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 MAF1Q9H063 256 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 ACAD9Q9H845 621 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 OLFML3Q9NRN5 406 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 AMFRQ9UKV5 643 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 UTP11Q9Y3A2 253 aaKnown RBP12.37□□□□□ -0.43
GNE-203ENST00000447283 BTBD19C9JJ37 291 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 F8VZ95 297 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 PDHXO00330 501 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 MEIS1O00470 390 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 PPFIA2O75334 1257 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 TOMM70O94826 608 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 TMEM253P0C7T8 217 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 MNAT1P51948 309 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 SMTNP53814 917 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 PPP2R5EQ16537 467 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 PTPROQ16827 1216 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 RNF187Q5TA31 235 aaPredicted RBP12.36□□□□□ -0.43
GNE-203ENST00000447283 RGMBQ6NW40 437 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 ANKRD23Q86SG2 305 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 RIOX2Q8IUF8 465 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 LNX1Q8TBB1 728 aaPredicted RBP12.36□□□□□ -0.43
GNE-203ENST00000447283 SYTL5Q8TDW5 730 aaPredicted RBP12.36□□□□□ -0.43
GNE-203ENST00000447283 RFFLQ8WZ73 363 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 TXLNGYQ9BZA5 131 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 SPATC1LQ9H0A9 340 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 ACTR5Q9H9F9 607 aaPredicted RBP12.36□□□□□ -0.43
GNE-203ENST00000447283 A1CFQ9NQ94 594 aaKnown RBP12.36□□□□□ -0.43
GNE-203ENST00000447283 RABGAP1Q9Y3P9 1069 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 LOC285556D6RIA3 1793 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 PARP14Q460N5 1801 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 EIF3DO15371 548 aaKnown RBP eCLIP12.36□□□□□ -0.43
GNE-203ENST00000447283 EVI5O60447 810 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 GAP43P17677 238 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 CIITAP33076 1130 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 SOX5P35711 763 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 EIF3BP55884 814 aaKnown RBP12.36□□□□□ -0.43
GNE-203ENST00000447283 PTENP60484 403 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 BAATQ14032 418 aaPredicted RBP12.36□□□□□ -0.43
GNE-203ENST00000447283 GJB7Q6PEY0 223 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 CCDC13Q8IYE1 715 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 PLCD3Q8N3E9 789 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 GTF3C2Q8WUA4 911 aaPredicted RBP12.36□□□□□ -0.43
GNE-203ENST00000447283 SYT11Q9BT88 431 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 POLR3CQ9BUI4 534 aaPredicted RBP12.36□□□□□ -0.43
GNE-203ENST00000447283 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 COL20A1Q9P218 1284 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 RBPJLQ9UBG7 517 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
GNE-203ENST00000447283 DDX20Q9UHI6 824 aaKnown RBP12.36□□□□□ -0.43
GNE-203ENST00000447283 RSPH10B2B2RC85 870 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 DDX3YO15523 660 aaKnown RBP12.35□□□□□ -0.43
GNE-203ENST00000447283 TGFB1I1O43294 461 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 BUB1BO60566 1050 aaPredicted RBP12.35□□□□□ -0.43
GNE-203ENST00000447283 PEX10O60683 326 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 TBCAO75347 108 aaKnown RBP12.35□□□□□ -0.43
GNE-203ENST00000447283 GCNT3O95395 438 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 EYA4O95677 639 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 SLC25A27O95847 323 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 RSPH10BP0C881 870 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 CYP2C8P10632 490 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 DHX9Q08211 1270 aaKnown RBP12.35□□□□□ -0.43
GNE-203ENST00000447283 CCDC91Q7Z6B0 441 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 ATP8B4Q8TF62 1192 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 TLCD1Q96CP7 247 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 NCAPGQ9BPX3 1015 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 RUSC1Q9BVN2 902 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 STK33Q9BYT3 514 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 CARD9Q9H257 536 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 CNOT10Q9H9A5 744 aaKnown RBP12.35□□□□□ -0.43
GNE-203ENST00000447283 CNOT8Q9UFF9 292 aaKnown RBP12.35□□□□□ -0.43
GNE-203ENST00000447283 VAV3Q9UKW4 847 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 NOVA2Q9UNW9 492 aaKnown RBP12.35□□□□□ -0.43
GNE-203ENST00000447283 FAM86B1E9PN63 330 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 CNMDO75829 334 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 RASSF9O75901 435 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 FGGP02679 453 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 FAM86B2P0C5J1 330 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 TMOD1P28289 359 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 UBXN2AP68543 259 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 SETQ01105 290 aaPredicted RBP12.35□□□□□ -0.43
GNE-203ENST00000447283 CLUL1Q15846 466 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 ODF2Q5BJF6 829 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 SLC30A10Q6XR72 485 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 CCDC121Q6ZUS5 278 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 NCAPG2Q86XI2 1143 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 RASAL3Q86YV0 1011 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 FMNL3Q8IVF7 1028 aa12.35□□□□□ -0.43
GNE-203ENST00000447283 SLC35G2Q8TBE7 412 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms