RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 LLPHQ9BRT6 129 aaKnown RBP20.21■□□□□ 0.83
COL9A1-205ENST00000447041 APOL6Q9BWW8 343 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 NFKBIZQ9BYH8 718 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 ADAM7Q9H2U9 754 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 NXF3Q9H4D5 531 aaKnown RBP20.21■□□□□ 0.83
COL9A1-205ENST00000447041 TUFT1Q9NNX1 390 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 TSHZ2Q9NRE2 1034 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 MARCH5Q9NX47 278 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 KANSL3Q9P2N6 904 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 FAN1Q9Y2M0 1017 aa20.21■□□□□ 0.83
COL9A1-205ENST00000447041 ARL5CA6NH57 179 aa20.2■□□□□ 0.82
COL9A1-205ENST00000447041 OR52Z1P0C646 297 aa20.2■□□□□ 0.82
COL9A1-205ENST00000447041 SCNN1GP51170 649 aa20.2■□□□□ 0.82
COL9A1-205ENST00000447041 ITIH3Q06033 890 aa20.2■□□□□ 0.82
COL9A1-205ENST00000447041 CES5AQ6NT32 575 aa20.2■□□□□ 0.82
COL9A1-205ENST00000447041 POTEGQ6S5H5 508 aa20.2■□□□□ 0.82
COL9A1-205ENST00000447041 TRIM67Q6ZTA4 783 aa20.2■□□□□ 0.82
COL9A1-205ENST00000447041 SLC22A17Q8WUG5 538 aa20.2■□□□□ 0.82
COL9A1-205ENST00000447041 FOXP1Q9H334 677 aaPredicted RBP20.2■□□□□ 0.82
COL9A1-205ENST00000447041 UBN1Q9NPG3 1134 aa20.2■□□□□ 0.82
COL9A1-205ENST00000447041 MIOSQ9NXC5 875 aa20.2■□□□□ 0.82
COL9A1-205ENST00000447041 PRG3Q9Y2Y8 225 aaPredicted RBP20.2■□□□□ 0.82
COL9A1-205ENST00000447041 TMEM221A6NGB7 291 aa20.19■□□□□ 0.82
COL9A1-205ENST00000447041 LRRIQ4A6NIV6 560 aa20.19■□□□□ 0.82
COL9A1-205ENST00000447041 M0R296 226 aa20.19■□□□□ 0.82
COL9A1-205ENST00000447041 INPPL1O15357 1258 aa20.19■□□□□ 0.82
COL9A1-205ENST00000447041 ALDH2P05091 517 aa20.19■□□□□ 0.82
COL9A1-205ENST00000447041 XRCC6P12956 609 aaKnown RBP eCLIP20.19■□□□□ 0.82
COL9A1-205ENST00000447041 NCBP1Q09161 790 aaKnown RBP20.19■□□□□ 0.82
COL9A1-205ENST00000447041 C8orf34Q49A92 452 aa20.19■□□□□ 0.82
COL9A1-205ENST00000447041 TTC38Q5R3I4 469 aa20.19■□□□□ 0.82
COL9A1-205ENST00000447041 COLGALT2Q8IYK4 626 aa20.19■□□□□ 0.82
COL9A1-205ENST00000447041 FBXO18Q8NFZ0 1043 aa20.19■□□□□ 0.82
COL9A1-205ENST00000447041 TRIM6Q9C030 488 aaPredicted RBP20.19■□□□□ 0.82
COL9A1-205ENST00000447041 DZANK1Q9NVP4 752 aa20.19■□□□□ 0.82
COL9A1-205ENST00000447041 DBR1Q9UK59 544 aaKnown RBP20.19■□□□□ 0.82
COL9A1-205ENST00000447041 DENND4AQ7Z401 1863 aa20.19■□□□□ 0.82
COL9A1-205ENST00000447041 WDFY4Q6ZS81 3184 aa20.19■□□□□ 0.82
COL9A1-205ENST00000447041 F8W810 466 aa20.18■□□□□ 0.82
COL9A1-205ENST00000447041 NPTXRO95502 500 aa20.18■□□□□ 0.82
COL9A1-205ENST00000447041 AKAP5P24588 427 aa20.18■□□□□ 0.82
COL9A1-205ENST00000447041 HOXD11P31277 338 aaPredicted RBP20.18■□□□□ 0.82
COL9A1-205ENST00000447041 OR1G1P47890 313 aa20.18■□□□□ 0.82
COL9A1-205ENST00000447041 HMGN5P82970 282 aaKnown RBP20.18■□□□□ 0.82
COL9A1-205ENST00000447041 DSC1Q08554 894 aa20.18■□□□□ 0.82
COL9A1-205ENST00000447041 NBR1Q14596 966 aa20.18■□□□□ 0.82
COL9A1-205ENST00000447041 PTPN21Q16825 1174 aa20.18■□□□□ 0.82
COL9A1-205ENST00000447041 SLC27A1Q6PCB7 646 aa20.18■□□□□ 0.82
COL9A1-205ENST00000447041 ZSCAN31Q96LW9 406 aaPredicted RBP20.18■□□□□ 0.82
COL9A1-205ENST00000447041 MFSD14AQ96MC6 490 aa20.18■□□□□ 0.82
COL9A1-205ENST00000447041 NECTIN4Q96NY8 510 aa20.18■□□□□ 0.82
COL9A1-205ENST00000447041 KLHL5Q96PQ7 755 aa20.18■□□□□ 0.82
COL9A1-205ENST00000447041 POLR3CQ9BUI4 534 aaPredicted RBP20.18■□□□□ 0.82
COL9A1-205ENST00000447041 C2CD4DB7Z1M9 353 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 C2CD2LO14523 706 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 LILRB3O75022 631 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 SOD2P04179 222 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 CNPP09543 421 aaKnown RBP20.17■□□□□ 0.82
COL9A1-205ENST00000447041 RPA1P27694 616 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 MTHFRP42898 656 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 ORC2Q13416 577 aaPredicted RBP20.17■□□□□ 0.82
COL9A1-205ENST00000447041 GNL2Q13823 731 aaKnown RBP20.17■□□□□ 0.82
COL9A1-205ENST00000447041 CDCA2Q69YH5 1023 aaPredicted RBP20.17■□□□□ 0.82
COL9A1-205ENST00000447041 KIAA1841Q6NSI8 718 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 TAS1R1Q7RTX1 841 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 CABP7Q86V35 215 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 NOSTRINQ8IVI9 506 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 FAM184AQ8NB25 1140 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 MCPH1Q8NEM0 835 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 ERMNQ8TAM6 284 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 BSNDQ8WZ55 320 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 FBXL18Q96ME1 805 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 RIPOR3Q96MK2 946 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 NACC1Q96RE7 527 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 HERC2P3Q9BVR0 1158 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 SH2B1Q9NRF2 756 aaPredicted RBP20.17■□□□□ 0.82
COL9A1-205ENST00000447041 STK39Q9UEW8 545 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 GIT1Q9Y2X7 761 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 NR2E1Q9Y466 385 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 PLXNA3P51805 1871 aa20.17■□□□□ 0.82
COL9A1-205ENST00000447041 ZNF318Q5VUA4 2279 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 KMT2EQ8IZD2 1858 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 A0A1B0GUA9 196 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 KLRC2P26717 231 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 RBM25P49756 843 aaKnown RBP20.16■□□□□ 0.82
COL9A1-205ENST00000447041 CLCN4P51793 760 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 SIGLEC14Q08ET2 396 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 TMC5Q6UXY8 1006 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 PPP4R3CPQ6ZMV5 832 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 BMP8AQ7Z5Y6 402 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 PPFIBP1Q86W92 1011 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 RNF168Q8IYW5 571 aaPredicted RBP20.16■□□□□ 0.82
COL9A1-205ENST00000447041 GSTCDQ8NEC7 633 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 PBXIP1Q96AQ6 731 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 EMILIN2Q9BXX0 1053 aa20.16■□□□□ 0.82
COL9A1-205ENST00000447041 MRPL17Q9NRX2 175 aaKnown RBP20.16■□□□□ 0.82
COL9A1-205ENST00000447041 C2orf16Q68DN1 1984 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 TTLL13PA6NNM8 815 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 EFEMP2O95967 443 aa20.15■□□□□ 0.82
COL9A1-205ENST00000447041 URODP06132 367 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms