RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 SSRP1Q08945 709 aaKnown RBP14.14□□□□□ -0.15
DDX56-206ENST00000446987 HSP90AA4PQ58FG1 418 aa14.14□□□□□ -0.15
DDX56-206ENST00000446987 TAPT1Q6NXT6 567 aa14.14□□□□□ -0.15
DDX56-206ENST00000446987 C8orf74Q6P047 294 aa14.14□□□□□ -0.15
DDX56-206ENST00000446987 TRAPPC9Q96Q05 1148 aa14.14□□□□□ -0.15
DDX56-206ENST00000446987 RMDN3Q96TC7 470 aa14.14□□□□□ -0.15
DDX56-206ENST00000446987 PDCD2LQ9BRP1 358 aa14.14□□□□□ -0.15
DDX56-206ENST00000446987 OSBPL1AQ9BXW6 950 aa14.14□□□□□ -0.15
DDX56-206ENST00000446987 RIC8AQ9NPQ8 531 aa14.14□□□□□ -0.15
DDX56-206ENST00000446987 GJB4Q9NTQ9 266 aa14.14□□□□□ -0.15
DDX56-206ENST00000446987 ZNHIT6Q9NWK9 470 aaKnown RBP14.14□□□□□ -0.15
DDX56-206ENST00000446987 DOCK5Q9H7D0 1870 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.13□□□□□ -0.15
DDX56-206ENST00000446987 ASB14A6NK59 587 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 DEXIO95424 95 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 PENKP01210 267 aaPredicted RBP14.13□□□□□ -0.15
DDX56-206ENST00000446987 MYZAPP0CAP1 466 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 EIF2AK2P19525 551 aaKnown RBP14.13□□□□□ -0.15
DDX56-206ENST00000446987 PAFAH1B1P43034 410 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 GJA8P48165 433 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 ACVR2BQ13705 512 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 TSR1Q2NL82 804 aaKnown RBP14.13□□□□□ -0.15
DDX56-206ENST00000446987 LMNTD2Q8IXW0 634 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 HDAC7Q8WUI4 952 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 TEKT4Q8WW24 435 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 DEFB118Q96PH6 123 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 ZMYND12Q9H0C1 365 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 PSTPIP2Q9H939 334 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 PDGFCQ9NRA1 345 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 HYOU1Q9Y4L1 999 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 LRRC42Q9Y546 428 aa14.13□□□□□ -0.15
DDX56-206ENST00000446987 ALPK3Q96L96 1907 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 SEPT4O43236 478 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 TACC1O75410 805 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 RGS20O76081 388 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 ABL2P42684 1182 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 PPP2R2AP63151 447 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 PGM5Q15124 567 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 QPCTQ16769 361 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 ANKRD20A2Q5SQ80 823 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 ANKRD20A1Q5TYW2 823 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 ANKRD20A3Q5VUR7 823 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 NUGGCQ68CJ6 796 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 EEPD1Q7L9B9 569 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 U2AF1L4Q8WU68 220 aaKnown RBP14.12□□□□□ -0.15
DDX56-206ENST00000446987 LZICQ8WZA0 190 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 NAF1Q96HR8 494 aaKnown RBP14.12□□□□□ -0.15
DDX56-206ENST00000446987 GSDMAQ96QA5 445 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 ABHD16BQ9H3Z7 469 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 JADE2Q9NQC1 790 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 TRIM10Q9UDY6 481 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 CAPN11Q9UMQ6 739 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.12□□□□□ -0.15
DDX56-206ENST00000446987 TNRC18O15417 2968 aaPredicted RBP14.12□□□□□ -0.15
DDX56-206ENST00000446987 SMCO2A6NFE2 343 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 NQO1P15559 274 aaKnown RBP14.12□□□□□ -0.15
DDX56-206ENST00000446987 EN2P19622 333 aaPredicted RBP14.12□□□□□ -0.15
DDX56-206ENST00000446987 RANBP1P43487 201 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 TRIM22Q8IYM9 498 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 GBP7Q8N8V2 638 aaPredicted RBP14.12□□□□□ -0.15
DDX56-206ENST00000446987 RETREG2Q8NC44 543 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 NSUN6Q8TEA1 469 aaKnown RBP14.12□□□□□ -0.15
DDX56-206ENST00000446987 IQCDQ96DY2 449 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 CHMP6Q96FZ7 201 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 TMEM260Q9NX78 707 aa14.12□□□□□ -0.15
DDX56-206ENST00000446987 RBM47A0AV96 593 aaKnown RBP14.11□□□□□ -0.15
DDX56-206ENST00000446987 M0R2N6 131 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 N4BP3O15049 544 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 ZNF185O15231 689 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 ACTN4O43707 911 aaKnown RBP14.11□□□□□ -0.15
DDX56-206ENST00000446987 SGPL1O95470 568 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 NR3C2P08235 984 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 ATP2A2P16615 1042 aaKnown RBP14.11□□□□□ -0.15
DDX56-206ENST00000446987 ADCYAP1R1P41586 468 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 ADCY7P51828 1080 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 COPB1P53618 953 aaKnown RBP14.11□□□□□ -0.15
DDX56-206ENST00000446987 SH3BGRP55822 239 aaPredicted RBP14.11□□□□□ -0.15
DDX56-206ENST00000446987 MRPS9P82933 396 aaKnown RBP14.11□□□□□ -0.15
DDX56-206ENST00000446987 KRT31Q15323 416 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 UBE2Q1Q7Z7E8 422 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 CPLX4Q7Z7G2 160 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 RAPGEF5Q92565 580 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 LRRC45Q96CN5 670 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 CHP1Q99653 195 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 TRIM4Q9C037 500 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 VTA1Q9NP79 307 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 OGDHLQ9ULD0 1010 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 GMEB1Q9Y692 573 aa14.11□□□□□ -0.15
DDX56-206ENST00000446987 EDIL3O43854 480 aa14.1□□□□□ -0.15
DDX56-206ENST00000446987 CREB3O43889 395 aa14.1□□□□□ -0.15
DDX56-206ENST00000446987 ARIH2O95376 493 aa14.1□□□□□ -0.15
DDX56-206ENST00000446987 GSTA2P09210 222 aa14.1□□□□□ -0.15
DDX56-206ENST00000446987 MXRA7P84157 204 aa14.1□□□□□ -0.15
DDX56-206ENST00000446987 KIF5AQ12840 1032 aa14.1□□□□□ -0.15
DDX56-206ENST00000446987 GNPTABQ3T906 1256 aa14.1□□□□□ -0.15
DDX56-206ENST00000446987 GJC2Q5T442 439 aaPredicted RBP14.1□□□□□ -0.15
DDX56-206ENST00000446987 ARHGEF16Q5VV41 709 aa14.1□□□□□ -0.15
DDX56-206ENST00000446987 SH3RF1Q7Z6J0 888 aa14.1□□□□□ -0.15
DDX56-206ENST00000446987 PIGWQ7Z7B1 504 aa14.1□□□□□ -0.15
DDX56-206ENST00000446987 RASGRP4Q8TDF6 673 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms