RNA–Protein interactions for RNA: ENST00000445853.5

FLOT1-206, Transcript of flotillin 1, humanhuman

TSL 1 (best)

Gene FLOT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-206ENST00000445853 NCKAP1LP55160 1127 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 PLCB3Q01970 1234 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 TIGD5Q53EQ6 642 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 SPECC1Q5M775 1068 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 SPOUT1Q5T280 376 aaKnown RBP13.13□□□□□ -0.31
FLOT1-206ENST00000445853 ATF7IP2Q5U623 682 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 FOXD4L5Q5VV16 416 aaPredicted RBP13.13□□□□□ -0.31
FLOT1-206ENST00000445853 SLFN12LQ6IEE8 588 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 Q7L0L9 218 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 FOXD4L4Q8WXT5 416 aaPredicted RBP13.13□□□□□ -0.31
FLOT1-206ENST00000445853 DDX12PQ92771 950 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 MRPL38Q96DV4 380 aaKnown RBP13.13□□□□□ -0.31
FLOT1-206ENST00000445853 CASD1Q96PB1 797 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 FAM193BQ96PV7 902 aaPredicted RBP13.13□□□□□ -0.31
FLOT1-206ENST00000445853 REEP2Q9BRK0 252 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 TMEM175Q9BSA9 504 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 PRDM12Q9H4Q4 367 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 TOPORSQ9NS56 1045 aaPredicted RBP13.13□□□□□ -0.31
FLOT1-206ENST00000445853 TYW1Q9NV66 732 aaKnown RBP13.13□□□□□ -0.31
FLOT1-206ENST00000445853 KCNH3Q9ULD8 1083 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 IPPQ9Y573 584 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 PCDHB13Q9Y5F0 798 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 SZT2Q5T011 3432 aa13.13□□□□□ -0.31
FLOT1-206ENST00000445853 FAM237AA0A1B0GTK4 181 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 OFD1O75665 1012 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 SLFN14P0C7P3 912 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 MCF2P10911 925 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 ATF7P17544 494 aaPredicted RBP13.12□□□□□ -0.31
FLOT1-206ENST00000445853 CTNNB1P35222 781 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 YARSP54577 528 aaKnown RBP13.12□□□□□ -0.31
FLOT1-206ENST00000445853 GTF2BQ00403 316 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 RNASELQ05823 741 aaKnown RBP13.12□□□□□ -0.31
FLOT1-206ENST00000445853 POSTNQ15063 836 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 UBXN11Q5T124 520 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 KANK3Q6NY19 840 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 USP49Q70CQ1 688 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 HAUS6Q7Z4H7 955 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 TMCO2Q7Z6W1 182 aaPredicted RBP13.12□□□□□ -0.31
FLOT1-206ENST00000445853 RNF169Q8NCN4 708 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 FAM161BQ96MY7 647 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 ZNF558Q96NG5 402 aa13.12□□□□□ -0.31
FLOT1-206ENST00000445853 CCDC94Q9BW85 323 aaPredicted RBP13.12□□□□□ -0.31
FLOT1-206ENST00000445853 GTPBP4Q9BZE4 634 aaKnown RBP13.12□□□□□ -0.31
FLOT1-206ENST00000445853 MRPL42Q9Y6G3 142 aaKnown RBP13.12□□□□□ -0.31
FLOT1-206ENST00000445853 LOXHD1Q8IVV2 1947 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 PVALEFA0A1B0GWK0 134 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 FRMD3A2A2Y4 597 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 SLC16A4O15374 487 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 POLR2DO15514 142 aaKnown RBP13.11□□□□□ -0.31
FLOT1-206ENST00000445853 CLDN3O15551 220 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 PIGRP01833 764 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 ALDH2P05091 517 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 FGFR1P11362 822 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 SNRPFP62306 86 aaKnown RBP13.11□□□□□ -0.31
FLOT1-206ENST00000445853 GPM6BQ13491 265 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 DHX8Q14562 1220 aaKnown RBP13.11□□□□□ -0.31
FLOT1-206ENST00000445853 E2F4Q16254 413 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 CLLU1OSQ5K130 101 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 MPZL3Q6UWV2 235 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 ZNF720Q7Z2F6 126 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 ACO2Q99798 780 aaKnown RBP13.11□□□□□ -0.31
FLOT1-206ENST00000445853 C7orf25Q9BPX7 421 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 C17orf80Q9BSJ5 609 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 TCHPQ9BT92 498 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 PDZD7Q9H5P4 517 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 TMEM206Q9H813 350 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 PLEKHA5Q9HAU0 1116 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 PTPRHQ9HD43 1115 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 SPG21Q9NZD8 308 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 HOOK1Q9UJC3 728 aaKnown RBP13.11□□□□□ -0.31
FLOT1-206ENST00000445853 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 SSX2IPQ9Y2D8 614 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 MICAL3Q7RTP6 2002 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 EVPLQ92817 2033 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 WDR81Q562E7 1941 aa13.11□□□□□ -0.31
FLOT1-206ENST00000445853 SFI1A8K8P3 1242 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
FLOT1-206ENST00000445853 LINC00271P0C7V0 271 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 IGFBP4P22692 258 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 PROZP22891 400 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 GRM5P41594 1212 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 GRIK3Q13003 919 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 FOXD4L6Q3SYB3 417 aaPredicted RBP13.1□□□□□ -0.31
FLOT1-206ENST00000445853 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
FLOT1-206ENST00000445853 KCNT2Q6UVM3 1135 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 FOXD4L3Q6VB84 417 aaPredicted RBP13.1□□□□□ -0.31
FLOT1-206ENST00000445853 AGMOQ6ZNB7 445 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 CD302Q8IX05 232 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 GPR65Q8IYL9 337 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 THNSL1Q8IYQ7 743 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 PDILTQ8N807 584 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 SMG8Q8ND04 991 aaKnown RBP13.1□□□□□ -0.31
FLOT1-206ENST00000445853 HELQQ8TDG4 1101 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 MYLIPQ8WY64 445 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 CCDC47Q96A33 483 aaKnown RBP13.1□□□□□ -0.31
FLOT1-206ENST00000445853 DNAJC19Q96DA6 116 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 CPB2Q96IY4 423 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 RPS6KC1Q96S38 1066 aa13.1□□□□□ -0.31
FLOT1-206ENST00000445853 ZHX3Q9H4I2 956 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms