RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 TANGO2Q6ICL3 276 aa16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 LILRA6Q6PI73 481 aa16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 DGKHQ86XP1 1220 aa16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 STAG2Q8N3U4 1231 aa16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 METTL13Q8N6R0 699 aa16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 MTMR8Q96EF0 704 aa16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 ZNF668Q96K58 619 aaPredicted RBP16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 SLC9A2Q9UBY0 812 aa16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 PTPN13Q12923 2485 aa16.21■□□□□ 0.18
SYNCRIP-203ENST00000444272 NOTCH4Q99466 2003 aa16.21■□□□□ 0.18
SYNCRIP-203ENST00000444272 PCNX2A6NKB5 2137 aa16.21■□□□□ 0.18
SYNCRIP-203ENST00000444272 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 ATXN7O15265 892 aaPredicted RBP16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 CCL16O15467 120 aa16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 HBP1O60381 514 aa16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 OFD1O75665 1012 aa16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 C1RP00736 705 aa16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 CCNE1P24864 410 aa16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 DSG1Q02413 1049 aa16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 PLK5Q496M5 336 aa16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 ZMYM1Q5SVZ6 1142 aa16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 TSHZ3Q63HK5 1081 aa16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 MCRS1Q96EZ8 462 aa16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 MARCH5Q9NX47 278 aa16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 PRG3Q9Y2Y8 225 aaPredicted RBP16.2■□□□□ 0.18
SYNCRIP-203ENST00000444272 NUP205Q92621 2012 aa16.19■□□□□ 0.18
SYNCRIP-203ENST00000444272 COL1A2P08123 1366 aa16.19■□□□□ 0.18
SYNCRIP-203ENST00000444272 ITGB5P18084 799 aa16.19■□□□□ 0.18
SYNCRIP-203ENST00000444272 MTMR1Q13613 665 aa16.19■□□□□ 0.18
SYNCRIP-203ENST00000444272 ELSPBP1Q96BH3 223 aa16.19■□□□□ 0.18
SYNCRIP-203ENST00000444272 B3GALT6Q96L58 329 aa16.19■□□□□ 0.18
SYNCRIP-203ENST00000444272 FAM193BQ96PV7 902 aaPredicted RBP16.19■□□□□ 0.18
SYNCRIP-203ENST00000444272 TMEM175Q9BSA9 504 aa16.19■□□□□ 0.18
SYNCRIP-203ENST00000444272 ZBTB42B2RXF5 422 aa16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 C22orf31O95567 290 aa16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 HNRNPA1P09651 372 aaKnown RBP eCLIP16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 RLBP1P12271 317 aa16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 RPL17P18621 184 aaKnown RBP16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 ACTR2P61160 394 aa16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 HAND2P61296 217 aa16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 PPM1LQ5SGD2 360 aa16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 RAB44Q7Z6P3 723 aaPredicted RBP16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 RNF168Q8IYW5 571 aaPredicted RBP16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 URGCPQ8TCY9 931 aa16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 IRF7Q92985 503 aa16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 ZNF334Q9HCZ1 680 aaPredicted RBP16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 HCFC1R1Q9NWW0 138 aa16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 AKT3Q9Y243 479 aa16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 URB1O60287 2271 aaKnown RBP16.18■□□□□ 0.18
SYNCRIP-203ENST00000444272 BCLAF3A2AJT9 711 aaKnown RBP16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 KHNYNO15037 678 aaKnown RBP16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 AKAP3O75969 853 aa16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 SLC26A2P50443 739 aa16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 CLCN3P51790 818 aa16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 WDR44Q5JSH3 913 aa16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 ZNF484Q5JVG2 852 aa16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 LIN9Q5TKA1 542 aa16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 TMEFF1Q8IYR6 380 aa16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 SMARCC2Q8TAQ2 1214 aa16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 MBOAT7Q96N66 472 aa16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 PIGSQ96S52 555 aa16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 TRMT61BQ9BVS5 477 aaKnown RBP16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 DUSP15Q9H1R2 295 aaPredicted RBP16.17■□□□□ 0.18
SYNCRIP-203ENST00000444272 PLXNB3Q9ULL4 1909 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 PATE3B3GLJ2 98 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 B4E1Z4 1266 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 KLRF2D3W0D1 207 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 PYCARD-AS1I3L0S3 204 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 SMARCA5O60264 1052 aaPredicted RBP16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 XYLBO75191 536 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 C8AP07357 584 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 GDI1P31150 447 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 AFF1P51825 1210 aaKnown RBP16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 TRAF1Q13077 416 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 ELF2Q15723 593 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 PABPC1LQ4VXU2 614 aaKnown RBP16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 TWF2Q6IBS0 349 aaKnown RBP16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 USP17L6PQ6QN14 398 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 POTEHQ6S545 545 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 MFSD6Q6ZSS7 791 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 MAP4K3Q8IVH8 894 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 MIER1Q8N108 512 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 FBXW11Q9UKB1 542 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 KCNH3Q9ULD8 1083 aa16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 MRPS23Q9Y3D9 190 aaKnown RBP16.16■□□□□ 0.18
SYNCRIP-203ENST00000444272 EXTL3O43909 919 aa16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 ANKRD17O75179 2603 aaKnown RBP16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 HMMRO75330 724 aa16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 CSDE1O75534 798 aaKnown RBP16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 EFEMP2O95967 443 aa16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 FCARP24071 287 aa16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 SCLT1Q96NL6 688 aa16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 TRPV5Q9NQA5 729 aa16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 CHST7Q9NS84 486 aa16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 GDE1Q9NZC3 331 aa16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 FNIP2Q9P278 1114 aa16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 DNMT3BQ9UBC3 853 aaKnown RBP16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 BAZ2BQ9UIF8 2168 aaKnown RBP16.15■□□□□ 0.18
SYNCRIP-203ENST00000444272 MYO9AB2RTY4 2548 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms