RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 HAUS6Q7Z4H7 955 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 CCDC65Q8IXS2 484 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 TMEM161BQ8NDZ6 487 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 URGCPQ8TCY9 931 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 ARNTL2Q8WYA1 636 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 MRPS27Q92552 414 aaKnown RBP11.91□□□□□ -0.5
HDAC6-211ENST00000443563 DNAJC19Q96DA6 116 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 CCDC34Q96HJ3 373 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 CASD1Q96PB1 797 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 PLVAPQ9BX97 442 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 ST6GALNAC4Q9H4F1 302 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 KANSL3Q9P2N6 904 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 TNFSF13BQ9Y275 285 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 ZMYM2Q9UBW7 1377 aa11.91□□□□□ -0.5
HDAC6-211ENST00000443563 FAM237AA0A1B0GTK4 181 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 A0A1B0GVL5 298 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 RBAK-RBAKDNI3L0D1 243 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 K7ENM7 598 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 NPTXRO95502 500 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 SLFN14P0C7P3 912 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 IDEP14735 1019 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 PFKFB1P16118 471 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 ATF7P17544 494 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-211ENST00000443563 CTNNB1P35222 781 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 SYKP43405 635 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 ALCAMQ13740 583 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 GRIN2CQ14957 1233 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 EPC2Q52LR7 807 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 CNNM4Q6P4Q7 775 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 ZPBP2Q6X784 338 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 TMEM192Q8IY95 271 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 LRRC43Q8N309 656 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 FBXO22Q8NEZ5 403 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 HELQQ8TDG4 1101 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 HVCN1Q96D96 273 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 ACO2Q99798 780 aaKnown RBP11.9□□□□□ -0.5
HDAC6-211ENST00000443563 C7orf25Q9BPX7 421 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 EIF2AQ9BY44 585 aaKnown RBP11.9□□□□□ -0.5
HDAC6-211ENST00000443563 TRIM9Q9C026 710 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 PDZD7Q9H5P4 517 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 RSAD1Q9HA92 442 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 GDPD2Q9HCC8 539 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 OLFML3Q9NRN5 406 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 PANK4Q9NVE7 773 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 HPSEQ9Y251 543 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 GIT1Q9Y2X7 761 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 IPPQ9Y573 584 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 PCDHB12Q9Y5F1 795 aa11.9□□□□□ -0.5
HDAC6-211ENST00000443563 COL4A4P53420 1690 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-211ENST00000443563 FRMD3A2A2Y4 597 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 C5orf67F2Z3F1 127 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 MYL1P05976 194 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 LAG3P18627 525 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 BMPR1AP36894 532 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 GATMP50440 423 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 GTF2BQ00403 316 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 HERC4Q5GLZ8 1057 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-211ENST00000443563 NOMO2Q5JPE7 1267 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 CLLU1OSQ5K130 101 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 NT5DC1Q5TFE4 455 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 STXBP4Q6ZWJ1 553 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 TAS1R3Q7RTX0 852 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 FSIP1Q8NA03 581 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
HDAC6-211ENST00000443563 LPPQ93052 612 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 P2RX5Q93086 422 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 BICD1Q96G01 975 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 CHAMP1Q96JM3 812 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 GUCD1Q96NT3 240 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 CDX2Q99626 313 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-211ENST00000443563 C17orf80Q9BSJ5 609 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 TCHPQ9BT92 498 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 C11orf84Q9BUA3 381 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-211ENST00000443563 PRDM12Q9H4Q4 367 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 MRPL44Q9H9J2 332 aaKnown RBP11.89□□□□□ -0.51
HDAC6-211ENST00000443563 CERS4Q9HA82 394 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 RNF19AQ9NV58 838 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 LMCD1Q9NZU5 365 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 TBX20Q9UMR3 447 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 PCDHB13Q9Y5F0 798 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 MRPL42Q9Y6G3 142 aaKnown RBP11.89□□□□□ -0.51
HDAC6-211ENST00000443563 REV3LO60673 3130 aa11.89□□□□□ -0.51
HDAC6-211ENST00000443563 TDRD15B5MCY1 1934 aaKnown RBP11.89□□□□□ -0.51
HDAC6-211ENST00000443563 H3BNC9 293 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 GTPBP6O43824 516 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-211ENST00000443563 OFD1O75665 1012 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 TOM1L1O75674 476 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 ARHGEF15O94989 841 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 MCF2P10911 925 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 FOSL2P15408 326 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 PPM1AP35813 382 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 NDUFA8P51970 172 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 ASIC1P78348 528 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 RNASELQ05823 741 aaKnown RBP11.88□□□□□ -0.51
HDAC6-211ENST00000443563 KYAT1Q16773 422 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 PTPROQ16827 1216 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 ZNF568Q3ZCX4 644 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 LONRF3Q496Y0 759 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 KANK3Q6NY19 840 aa11.88□□□□□ -0.51
HDAC6-211ENST00000443563 MPZL3Q6UWV2 235 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms